Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2139 ATGGTGATGGTGACGGGTTGGAGATACAGGGCTGGGTTGTTCCTCATTGGCACTGTTGTTATTATATGGGTTACCTCCGCAGAAGTTACCCAGGATATTTTTGAAGATTATAAGCAACCGTTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAGTATCATACTTTAAGGACTGGTTTTGTGAATATCTTAAACGACGGTCTTCTAAAAGTGGTAAAAATGCAGAAAGTGTAGATAAATTTTTTATCAGGATTGGCCCTCCAGTCAAAGGCAGTGGAATGGAGAAAAACTTTGAACTGGAATTCGGAAGTGTGATTCGGAAAGATAGCAAATTAGGCGTTTCGACTCTTGCCGAAGTCAAGCCATTGATGGCCAAGTATAATGATAATACTCATGTGATAAAATCAGAGAAGCAACTTACCGGCAAGCAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTCTGACTGAGTACTTCTCAAATGCTGCTCTTGCACGAACAAGTGTCGCAAGTTCGACAGTATTATCATCCACATCCGGGCTTTTCACTCTTTTTATTGGTGCAATTTTGGGTCAAGACTCTCTAAATGTACCAAAAGTGGTTGCTGTTTTTGTCAGCATGGCTGGGGTTCTTATGACAACTCTGGGGAAAACTTGGGCTGCAGATGATGATTTAATATCAATCAATGAAGAGCGCTCTTTCGTTGGAGATCTTTTCAGCATTCTCTCGGCAGTATCGTATGGCCTATTTACAGTTCTTCTTAAAAAGTTTTGTGGCGAAGAGGGAGAAAGAGTTGATGTGCAGAAGCTGTTTGGGTATATCGGACTCTTTACATTAGTCGCGCTTTGGTGGCTTATCTGGCCATTGATGGCCATGGGACTTGAGCCCAAGTTTGCTGTTCCTCAATCTGCTAAAATGGATGAAATGGTTCTTGCCAATGGATTCATTGGAAGTGTGGTTTCAGATTACTTCTGGGCACTTTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTAGGCATGTCGCTCACCATTCCGCTTGCTATGGTGGCTGACATGGTGATCCATGGTCGGCAATATTCTGTAGTGTATATTCTTGGCTCAGTTCAGGTATTTGCTGGCTTTGTATTAGCTAACCTTTCAGATTGGTTGTCAAAGAAGTGGAAATCATTCAAATTTTAG 1203 0.419 MVMVTGWRYRAGLFLIGTVVIIWVTSAEVTQDIFEDYKQPFAVTYLGASLMVVYLPVSYFKDWFCEYLKRRSSKSGKNAESVDKFFIRIGPPVKGSGMEKNFELEFGSVIRKDSKLGVSTLAEVKPLMAKYNDNTHVIKSEKQLTGKQIATYGFYIAPIWFLTEYFSNAALARTSVASSTVLSSTSGLFTLFIGAILGQDSLNVPKVVAVFVSMAGVLMTTLGKTWAADDDLISINEERSFVGDLFSILSAVSYGLFTVLLKKFCGEEGERVDVQKLFGYIGLFTLVALWWLIWPLMAMGLEPKFAVPQSAKMDEMVLANGFIGSVVSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRQYSVVYILGSVQVFAGFVLANLSDWLSKKWKSFKF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2139 400 Pfam EamA-like transporter family 140 221 IPR000620 GO:0016020|GO:0016021
Amo08g2139 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 224 - -
Amo08g2139 400 PANTHER OSJNBA0070O11.5 PROTEIN 6 394 - -
Amo08g2139 400 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 6 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2139 Amo-Chr8 34275354 34279316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2139 K15289 - gmx:100792013 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2139 08 34275354 34279316 Amo18g3462 18 137741441 137745633 hybridization
Amo16g3663 16 147457481 147459754 Amo08g2139 08 34275354 34279316 PCT
Amo06g2834 06 93655342 93659804 Amo08g2139 08 34275354 34279316 PCT
Amo08g2139 08 34275354 34279316 Amo16g3663 16 147457481 147459754 PCT
Amo08g2139 08 34275354 34279316 Amo06g2834 06 93655342 93659804 PCT