Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1698 ATGCCTTTAGTTGGGAAAGATTGGTCACAATCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAGGAAAATGGTTATCAGCTGCTATTTCTGAGTGCTCGTGCAATTGTCCAAGCTTATCTAACCAGGAATTTCTTGCTTAACCTGAAACAGGATGGAAATACCTTACCAAATGGACCTGTTGTTATTTCACCTGATGGATTATTCCCTTCACTATACCGAGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTGTTCCCTGCTGATTACAATCCATTCTATGCTGGATTTGGCAATAGAGACACAGATGAACTTAGCTACAGGAAGATAGGGATTCCAAAGGGCAAAATATTTATTATTAATCCTAAGGGTGAGGTAGCAATAAGTCAAAGAATTGATTCAAAATCTTACACATCATTGCACACCCTTGTCAATGACATGTTCCCACCTACTTCTTTGGTTGAGCATGAGGACTTCAACTCATGGAATTATTGGAGAGTCCCRATTCCAGATYTCAATGACAATTAG 555 0.3928 MPLVGKDWSQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGNTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPADYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISQRIDSKSYTSLHTLVNDMFPPTSLVEHEDFNSWNYWRVPIPDXNDN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1698 184 SUPERFAMILY HAD-like 3 125 IPR036412 -
Amo16g1698 184 PANTHER LIPIN 1 181 IPR026058 -
Amo16g1698 184 SMART lns2 1 138 IPR031315 -
Amo16g1698 184 Pfam LNS2 (Lipin/Ned1/Smp2) 1 158 IPR013209 -
Amo16g1698 184 PANTHER PHOSPHATIDATE PHOSPHATASE PAH1 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1698 Amo-Chr16 33815517 33818983 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1698 K15728 - gmx:100780784 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1698 16 33815517 33818983 Amo06g1034 06 15090444 15096802 hybridization
Amo16g1698 16 33815517 33818983 Amo12g1110 12 30909258 30914125 PCT
Amo12g1110 12 30909258 30914125 Amo16g1698 16 33815517 33818983 PCT