Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1034 ATGAATGTGGTGGGAAAAGTTGGAAGCTTGATCACACAAGGTGTCTATTCAGTTGCTACCCCTTTTCATCCCTTTGGTGGTGCTGTTGATGTCATTGTTGTTCAGCAACAAGATGGTACATTTCGGAGCACGCCGTGGTATGTTCGGTTTGGTAAATTCCAGGGTGTTCTTAAAGGCGCTGAAAAGTTTGTTCGTATAAATGTCAATGGGGTTGAAGCAAACTTCCATATGTATCTTGACAATTCAGGAGAGGCTTATTTTATAAAGGAGGTGGATGATGATAAGGACGTTGAGTCAAGTGTGGCTGATGAAGATGCAGGTCAATCTGATTTTACTCATGTCCATAGACTTGACCATAGTATCTCTGATTCGGGGGTGCTTCGGTTAAAGGCTAATGATCGACCTCAAATACAAAGGGTGGAATCTGATCTTGATAGGAGATATTATGAACTCCAGGATGATGAACCTGGTGTTGACGGTTCATTTGAGTTGTCAGAATATGGGTCTAATCGATATGATAATCCCAATGGAGAGAATGGTTTGGACTCACATGGTTCCCATCCGGAAGTGGTATTGGTTAGTGTCGATGGTCATATGATGACSGCCCCAATATGTRGATCAGAGCAAAACGATGAGGAGAATGTGCAGTTAAAAAATCCTCAATTTCACCTTGGCCCAGCTGAAGGGACTGAGTTCTGTGAAGGAAATGAGTTTACTTCTGATGAAAATGCTTGGGCTGCTGATTATATTAGAAAGCTGGATGATTCAACAGATGATGTTCCATCCTGTAGTTATAACMGGAATGGGGGTGATAYGACATCAGAGATTGTGGCCAAAGTTCACCAAAGAGAGGAGGTACATGTTAGATACGCAGAAGCGACCTTGGTGATTAAAGATCAAGAAAATTATGTGCAATCTGATACAGAAGAGGTTGCATCTGGCTTGAGGAGAGAGACCGTTTTCAAAAGCTGTTTGGCATTAGAYCAATTTGGCCAGCAGGATGAAAATGCTGATTCGGAAGATGAAGGTTCCCCAGYGAAGGTTCAAAAATCAGCAGACGAATATAATGCAAATTGTTCAGTTGGTAATGAAAATGCACAAGAGSACATTAAGAGCCCTTGCAGCATTGATGAGTTATCTCCCCTTAGTAGGCCTACTTATTCTGATGAGAATGGATCTACAAAAGTGGAATTAGGAGGAGTTCAAGAGGTTGATGATAAAGCATCRGTGCATGTTGACACTGATTCTGGAAGTCATTCTGTTACTAATGATAATGAGACTGAAGGRAATGATGAACTCATTGAAAATTCAGTGTTGACKGATGGGGTAGATGATAGTAAACAAATTCCTGCACTTGATGATGCCAATAATCTAAGTGAGGAAATCGAACCCCAACCAACAACTTCCAATGATGAGGACCAAAGTTATTATGGGTTGGGATTTGAAATATCACTTTGTGGTCATGAGCTTAAAGTGGGTATGGGTTCAGTTGCTGCTGCTGAAACATTTGATGCACATAGGATATCCGCAGAGGAATTTAGAGCTTCTGCACCATTAATAATAAAAAATGAAAATCTTGTTGTCAAGTTCAGAGAGAGATATCTGYTGTGGGAAAAGGCCGCTCCTCTTATTCTTGGGATGGCTGTATTTGGTTTAGATTCACCTGTTAATCCCGATGATACAATTCCTGTGGAACAGGGGGATGCACTATCCAGGGATGGTGATGCTGGATCAGCTTCGTCTGGACGGARATGGAGACTTTGGCCTATTCCTTTTCGAAGAGTAAAGACACTAGAGCACAGTACTAGTAATGCATCAAGTGATGAGATCTTTGTAGATACCGAGTCCGAGTTGCAGTCTTCTCTTTTGGATCCGAGTCCAAAATCTTATAATCCTGGGTCTCCACATAAACAATTTGTTCGAACAAATGTTCCTGGTAATGAGCAGATAGCTTCCTTGAATCTCAAAGAAGGTCAAAATTTGGTAACATTCAGCTTCTCTACAAGGGTTCTTGGAACACAACAGGTTGATGCTCACATATACTTATGGAAATGGGATGCAAAAATTGTAATTTCAGATGTAGATGGAACTATTACCAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGGAAAGATTGGTCACAATCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAGGAAAATGGTTATCAGCTGCTGTTTCTGAGTGCTCGTGCAATTGTCCAAGCTTATCTAACCAGGAACTTCTTGCTTAACCTGAAACAGGATGGAAATACCTTACCAAATGGACCTGTTGTTATTTCACCTGATGGATTATTCCCTTCACTATACCGAGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTGTTCCCTGCTGATTACAATCCATTCTATGCTGGATTTGGCAATAGAGACACAGATGAACTTAGCTACAGGAAGATAGGGATCCCAAAAGGCAAAATATTTATTATTAATCCTAAGGGTGAGGTAGCAATAAGTCAAAGAATTGATTCAAAATCTTACACATCATTGCACACCCTTGTCAATGACATGTTCCCACCTACTTCTTTGGTTGAGCATGAGGACTTCAACTCATGGAATTATTGGAGAGTCCCYATTCCAGATRTCAATGACAATTAG 2676 0.407 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKFVRINVNGVEANFHMYLDNSGEAYFIKEVDDDKDVESSVADEDAGQSDFTHVHRLDHSISDSGVLRLKANDRPQIQRVESDLDRRYYELQDDEPGVDGSFELSEYGSNRYDNPNGENGLDSHGSHPEVVLVSVDGHMMTAPICXSEQNDEENVQLKNPQFHLGPAEGTEFCEGNEFTSDENAWAADYIRKLDDSTDDVPSCSYNRNGGDXTSEIVAKVHQREEVHVRYAEATLVIKDQENYVQSDTEEVASGLRRETVFKSCLALDQFGQQDENADSEDEGSPXKVQKSADEYNANCSVGNENAQEXIKSPCSIDELSPLSRPTYSDENGSTKVELGGVQEVDDKASVHVDTDSGSHSVTNDNETEGNDELIENSVLTDGVDDSKQIPALDDANNLSEEIEPQPTTSNDEDQSYYGLGFEISLCGHELKVGMGSVAAAETFDAHRISAEEFRASAPLIIKNENLVVKFRERYLLWEKAAPLILGMAVFGLDSPVNPDDTIPVEQGDALSRDGDAGSASSGRXWRLWPIPFRRVKTLEHSTSNASSDEIFVDTESELQSSLLDPSPKSYNPGSPHKQFVRTNVPGNEQIASLNLKEGQNLVTFSFSTRVLGTQQVDAHIYLWKWDAKIVISDVDGTITKSDVLGQFMPLVGKDWSQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGNTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPADYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISQRIDSKSYTSLHTLVNDMFPPTSLVEHEDFNSWNYWRVPIPDXNDN* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1034 891 MobiDBLite consensus disorder prediction 556 577 - -
Amo06g1034 891 Pfam LNS2 (Lipin/Ned1/Smp2) 644 865 IPR013209 -
Amo06g1034 891 MobiDBLite consensus disorder prediction 351 370 - -
Amo06g1034 891 Pfam lipin, N-terminal conserved region 1 100 IPR007651 -
Amo06g1034 891 MobiDBLite consensus disorder prediction 410 429 - -
Amo06g1034 891 MobiDBLite consensus disorder prediction 167 181 - -
Amo06g1034 891 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 481 557 IPR031703 -
Amo06g1034 891 PANTHER LIPIN 1 888 IPR026058 -
Amo06g1034 891 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 888 - -
Amo06g1034 891 MobiDBLite consensus disorder prediction 439 474 - -
Amo06g1034 891 MobiDBLite consensus disorder prediction 332 397 - -
Amo06g1034 891 MobiDBLite consensus disorder prediction 460 474 - -
Amo06g1034 891 MobiDBLite consensus disorder prediction 379 395 - -
Amo06g1034 891 SMART lns2 689 845 IPR031315 -
Amo06g1034 891 MobiDBLite consensus disorder prediction 155 187 - -
Amo06g1034 891 SUPERFAMILY HAD-like 681 831 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1034 Amo-Chr6 15090444 15096802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1034 K15728 - gmx:100798304 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1698 16 33815517 33818983 Amo06g1034 06 15090444 15096802 hybridization
Amo06g1034 06 15090444 15096802 Amo12g1110 12 30909258 30914125 PCT
Amo12g1110 12 30909258 30914125 Amo06g1034 06 15090444 15096802 PCT