Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0190 ATGGGTATTGCAGCTGCTGCTGTGGTTGTGCCATTTGGCCTCCTCTTCTTCACTTCAGGCCTCGCTGTTAATCTCATTCAGGCAGTATCTTATGTTCTTGTACGGCCTCTGTCAAAGAATCTGCACAGGCGGATCAACCGTGTAGTTGCAGAATTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCTGGTGTTAAGGTTGAAGTATTCACAGATCATGAAACGTTCCAATTGATGGGTAAAGAGCATGCCCTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGCTCAGGTTGCCTTGGCAGTACTTTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGTTGGTCAATGTGGTTTTCTGAGTATCTTTTCCTAGAGAGAAGCTGGGCCAAGGATGAGAGCACATTAAAGTCAGGCATCCAGCGACTGAGCGATTTTCCTCTTCCGTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTCACACAAGCTAAACTATTAGCTGCTCAAGAATATGCAGCCTCTGCTGGATTGCCTATTCCTAGAAATGTTTTGATTCCTAGAACTAAGGGATTTGTTTCAGCAGTAAGTCACATGCGCTCATTTGTTCCTGCCATTTATGACGTAACAGTGGCTATCCCCAAGTGTTCACCCACCCCTACAATGCTTAGACTCTTAAAAGGGCAACCCTCAGTGGTGCAAGTTCACATCAAGCGCCATTTGATGAATGAATTGCCAGAAACAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTATTTGTTGCCAAGGATGCATTATTAGACAAACATATAGCTGAAGATACTTTTAGTGATAAAGAGCTGCAGGATACTGGTCGGCCAAAAAAATCTCTTCTGGTAACCATATCTTGGTCTGGTCTGATTGTTACGGGAGCCGTCAAGTTTCTCCGATGGACTTCGCTACTATCATCCTGGAAGGGTATTGCAATTTCAACTGCTAGTTTGGCAGTCGTTACTGGCCTCATGCAAATCTTGATTATGTTCTCACAGTCGGAGCGTTCAACGCCGGCCAAGGTCCTCCCTGCAAAGCCAAAGAGCACAGGGGAACAAGTGGAAGATAAGAATGTCAAACAACAGTAG 1164 0.4493 MGIAAAAVVVPFGLLFFTSGLAVNLIQAVSYVLVRPLSKNLHRRINRVVAELLWLELVWLIDWWAGVKVEVFTDHETFQLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKCSPTPTMLRLLKGQPSVVQVHIKRHLMNELPETDEAVAQWCRDVFVAKDALLDKHIAEDTFSDKELQDTGRPKKSLLVTISWSGLIVTGAVKFLRWTSLLSSWKGIAISTASLAVVTGLMQILIMFSQSERSTPAKVLPAKPKSTGEQVEDKNVKQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0190 387 MobiDBLite consensus disorder prediction 362 387 - -
Amo16g0190 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Amo16g0190 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Amo16g0190 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Amo16g0190 387 CDD LPLAT_LCLAT1-like 62 253 - -
Amo16g0190 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 38 284 - -
Amo16g0190 387 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Amo16g0190 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0190 Amo-Chr16 2603898 2609812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0190 3 375 Miscellaneous Gene Families AT3G57650 78.016 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0190 K13523 - gmx:100812696 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0190 16 2603898 2609812 Amo16g0190 16 2603898 2609812 ECH
Amo16g0190 16 2603898 2609812 Amo12g1738 12 83590544 83598147 PCT
Amo16g0190 16 2603898 2609812 Amo02g1910 02 61499834 61506300 PCT
Amo12g1738 12 83590544 83598147 Amo16g0190 16 2603898 2609812 PCT
Amo02g1910 02 61499834 61506300 Amo16g0190 16 2603898 2609812 PCT