Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1910 TTAATTAATTATATAACAATATGTTATTGCCTTGTACGACCAATATCCAAGAGTTTGTACAGAAGAATCAGTAGGGTAGCACTAGAATTGTTGTGGCTAGAACTTGTATGGCTATTTGATTGGTGGGCAGGAGTTAAGCTCCAAATATTCACAGATCAAGAAATCATAAACAAGATGGGTAAAGAGCATGCACTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGATATTAGCTCAGCGATCTGGATGCCTTGGCAGTGCCCTTGCTGTGATGAAGAAGTCATCAAAGTTTCTTCCGGTGATTGGTTGGTCAATGTGGTTTGCTGAATATCTTTTTCTAGAGAGAAGTTGGGCGAAAGATGAAAACACATTGAAGTCAGGCATACAACAACTTCAGGATTATCCTCTTCCTTTTTGGTTGGCTCTCTTTGTGGAAGGAACAAGATTTACACAGGCCAAACTTTTAGCTGCTCAGGAATATGCAACCACAACTGGATTGCCTGTTCCTAGAAACGTTTTGATTCCAAGAACTAAGGGATTTGTTTCAGCAGTGAGCAATATGCGTTCTTTTGTTCCTGCCATTTATGATGTAACTCTAGCCATTCCTAAGAATTCACCTCCTCCGACATTGCTAAGAATCTTCAAGGGAGAACCTTCAGTGGTGCATGTTCATATTAAACGACATTTGATGAATGAATTACCCAAGGATGATGAAGGTGTTGCTCAATGGTGTCGAGATGTATTTGTGGCTAAGGATGCRTTGTTAGACAAACATAAATATGAAGATAAATTTAGTGACAAAGAATCTCATGATGCTGGTAAACCAATCAAGTCTCTATTGGTTGTTATATCATGGTATATTTTGCTTTTTGTGGGATTTGTGAAGTTCGTTCTCTTTTTTCCACTACTAATGTCATGGAAAGGTCTCACAATTTCAATRGCTGCTTTGGGAGTTGTTACTATCCTAATGCAAATTTTRATTCGKTTCTCACAATCTGAGCATTCAACACCAGCAAAAGTTGTCCCTATAAAAACAAATAGAGGAGAACAGTTACAAGCAGAGACTAGGGACATTGTGAATGTTTTAGAATTTATGTGA 1113 0.3792 LINYITICYCLVRPISKSLYRRISRVALELLWLELVWLFDWWAGVKLQIFTDQEIINKMGKEHALVICNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFAEYLFLERSWAKDENTLKSGIQQLQDYPLPFWLALFVEGTRFTQAKLLAAQEYATTTGLPVPRNVLIPRTKGFVSAVSNMRSFVPAIYDVTLAIPKNSPPPTLLRIFKGEPSVVHVHIKRHLMNELPKDDEGVAQWCRDVFVAKDALLDKHKYEDKFSDKESHDAGKPIKSLLVVISWYILLFVGFVKFVLFFPLLMSWKGLTISXAALGVVTILMQILIRFSQSEHSTPAKVVPIKTNRGEQLQAETRDIVNVLEFM* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1910 370 CDD LPLAT_LCLAT1-like 39 231 - -
Amo02g1910 370 Pfam Acyltransferase 53 206 IPR002123 GO:0016746
Amo02g1910 370 SMART plsc_2 64 186 IPR002123 GO:0016746
Amo02g1910 370 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 17 222 - -
Amo02g1910 370 Pfam Acyltransferase C-terminus 217 290 IPR032098 -
Amo02g1910 370 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 6 353 - -
Amo02g1910 370 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 6 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1910 Amo-Chr2 61499834 61506300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1910 4 361 Miscellaneous Gene Families AT3G57650 69.832 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1910 K13523 - gmx:100812696 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1738 12 83590544 83598147 Amo02g1910 02 61499834 61506300 hybridization
Amo16g0190 16 2603898 2609812 Amo02g1910 02 61499834 61506300 PCT
Amo02g1910 02 61499834 61506300 Amo16g0190 16 2603898 2609812 PCT