Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0172 ATGGGTTGGGAATTGCTCTTCTGGCTGCTTCTTTGTTTCCCTCTCAACATTGCCTTTTTTGCCTCTTCTTTCTACCAGGTTTTGATATTATCGGACTTGGAAGATGACTATATGAACCCTTTTGATGCCTCGTCTCGAGTCAATTACTTCGTGGTTCCCGAGTTTATTGGGCAGGGATTACTCTGTGCTCTTTGCCTCCTCACAGGTCATTGGATCATGTTTTTGCTCACACTTCCTCTTGCTTGCTATCATGCCAATCTGTTTATGAAACGGCAGCATCTTCTTGATGTTACTGAAGTTTTTAGGGTGCTTAAAGCTGAGAAGAAATTTCGGATTGTCAAACTTGCTTTCTACTTATCAGTCCTGATTATAACTATCTTCAGGCTTGTACTACTACTTGTCTACTATTTTGATCTTGAAGATGAATGA 429 0.4056 MGWELLFWLLLCFPLNIAFFASSFYQVLILSDLEDDYMNPFDASSRVNYFVVPEFIGQGLLCALCLLTGHWIMFLLTLPLACYHANLFMKRQHLLDVTEVFRVLKAEKKFRIVKLAFYLSVLIITIFRLVLLLVYYFDLEDE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0172 142 PANTHER CORNICHON-RELATED 2 132 - -
Amo16g0172 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Amo16g0172 142 PANTHER PROTEIN CORNICHON 2 132 - -
Amo16g0172 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0172 Amo-Chr16 2337840 2340990 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0172 K20368 - gmx:100500341 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0172 16 2337840 2340990 Amo12g1777 12 85527524 85530546 PCT
Amo16g0172 16 2337840 2340990 Amo02g1955 02 63653703 63657926 PCT
Amo12g1777 12 85527524 85530546 Amo16g0172 16 2337840 2340990 PCT
Amo02g1955 02 63653703 63657926 Amo16g0172 16 2337840 2340990 PCT