Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1955 ATGGGTGGGAAACTCTTCTTTTGGCTCGTCATTTGTTTCCCTTCCAGCATTGCCCTTCTCGCCACAACTTTCTACCAGGTTTTGATCCTATCTGACTTGGAAGCTGACTATATAAACCCGTTCGACGCGGCGTCTCGGATTAACTACTTCATTCTTCCTGAGTACATAGGACAGGGAGCTCTCTGCGTACTSTGCCTCKTCACTGGACACTGGTTCATGTTCTTGCTCTCTCTTCCAGTTACTTGCYATCACATCATGCGATATGTGAAACGGGAGCAYCTTATTGATGTTACTGAAGTGTTTAGAGGACTTAATGCTGAGAGGAAATTTCGGCTAGCCAAACTTGTCATGTACTTAATACTCCTCATTGTAGTCATATTCAGGATTCTGGCAGCAGGAAGTTCAATATTTTACCACAATTCCAAGTTTGAAGAATTAGACATTCGGTTGAATACTCTAGGATACTAG 468 0.4274 MGGKLFFWLVICFPSSIALLATTFYQVLILSDLEADYINPFDAASRINYFILPEYIGQGALCVLCLXTGHWFMFLLSLPVTCXHIMRYVKREHLIDVTEVFRGLNAERKFRLAKLVMYLILLIVVIFRILAAGSSIFYHNSKFEELDIRLNTLGY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1955 155 PANTHER CORNICHON-RELATED 4 132 - -
Amo02g1955 155 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Amo02g1955 155 PANTHER PROTEIN CORNICHON 4 132 - -
Amo02g1955 155 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1955 Amo-Chr2 63653703 63657926 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1955 K20368 - gmx:100819066 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1777 12 85527524 85530546 Amo02g1955 02 63653703 63657926 hybridization
Amo16g0172 16 2337840 2340990 Amo02g1955 02 63653703 63657926 PCT
Amo02g1955 02 63653703 63657926 Amo16g0172 16 2337840 2340990 PCT