Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0303 ATGGAGTTTTTCACCAAGGCAAAAGCCGTTAAGCTCCGCAGCCACCTCGACAAGTACCTCGTGGCGGACCGGGACCTCGAGAAAGTCCACCAGAGCCGAAAAGGCGACACAAGAAGGGCCAAATGGATCGTTGAAGTCGTGAACGATGACGACATCAACGGCGGCGGCGGCAGCCACCGCGTCCGGCTGAAGAGCTGCCACGGGAGGTATCTTGCCGCTACGGAAACCCCTTTCCTCCTTGGGATGACCGGAAACAGGGTGGTCCAGGCAGAGTTTGACAACAGCCTCAGTTGGAAGTTCGAGTGGGAACCGGTTCGAGACGGTTTCCAGGTCAGGCTCCGGAGCTGGTGCGGGAAGTTTCTCAGAGGGAACGGTGCGACTCTTCCGTGGAGGAACACCGTCACTCACGACGACCCTGTTGCAGGAATTTCAAGTGGTTGGGTCCTATGGGATGTTGAGGCTGTGGAATTGCCGGAAGAAGAGGAAGATGATGAGGTGGATGAGTATGCTTCTTTGGCTTTCTCCGATGAGTTTTTCGCCCCTTCAGACCCGCCGTCGCCGATGTCCGTTTTCTCCCTCAAGTCTCCGCCAGTGAGGCAGGCCTCCAAGTTGGGTCAGAAAACGACCTCAAACAACAAATTCCGAAACGGCATGGATTTCTTCCGGCACGCAAAGGCGGTGCGCCTCCGCAGCCACCATGACAAGTACCTCATAGCGGAGGACGACGAGGAAACCGTTACGCAGGACCGCAACGGTGCCTCCAAGAGTGCCAGGTGGCACGTAGAGTACGTGGACAGTTACGACAACATAATCCGCCTCAAAAGCTGTTACGGAAAGTACCTAACCGCCTCAACAAACCCGTTCCTCCTTGGCATGACGGGGAGGAAGGTTCTCCAGACGCTACCTTCCAGATTGGACTCTTCAGTTGAATGGGAACCGGTTAAGGACGGTGGGCGCGTGAAGCTGAAGACGCGCTATGGGAACTTTTTGAGGGCAAATGGTGGTGTTCCTCCGTGGAGGAACTCCGTGACTCATGATATTCCGCATAGGACGGCCACGCAGGATTGGGTTCTTTGGGATGTTGATGTGGTGGAGATTCATGTTCGTCACTCTCCGACGACTCAGAAGAATGAAGAGATGGCGGCGGTGCTGGAGAATCTCAAGCAGCCTTCTGCTCCGCCGTTGCCGAGGGCGGAGGAGGAGGAGGAGAATCTTGATGAGAGGTTTGGAATGAGCAACGCCCCGTCATCTCGTAAGCACGCCAAGTCTGGAAGCTTCTTGAGGCAGTGGAGTAATATGAGTGGCGGGTCGTCACCCAAGGTGGAAGGAAGAACCATATACTACCATGTTGCTGAAGACAATGGAGAAGTAACTGATGAAGGCGCAGGGTATTCCTTGAATTTCAAGGGTAATGGAGTTGAAGAACTAACTCGTAAGTTTGAGGAAGAGACAGGTCTAGAGGGTATCATTGTGTGTAATAGGAGTCCATTGAATGGAAAACTATATCCTCTTCGCTTGCAGCTTCCTCCAAACAATGTTACCATGCAAGTTGTCCTTGTTCTTCCTTATTCACAAGTGGCAAGAGACTTTGAGGCACAAGGTTTAATTTGA 1611 0.5326 MEFFTKAKAVKLRSHLDKYLVADRDLEKVHQSRKGDTRRAKWIVEVVNDDDINGGGGSHRVRLKSCHGRYLAATETPFLLGMTGNRVVQAEFDNSLSWKFEWEPVRDGFQVRLRSWCGKFLRGNGATLPWRNTVTHDDPVAGISSGWVLWDVEAVELPEEEEDDEVDEYASLAFSDEFFAPSDPPSPMSVFSLKSPPVRQASKLGQKTTSNNKFRNGMDFFRHAKAVRLRSHHDKYLIAEDDEETVTQDRNGASKSARWHVEYVDSYDNIIRLKSCYGKYLTASTNPFLLGMTGRKVLQTLPSRLDSSVEWEPVKDGGRVKLKTRYGNFLRANGGVPPWRNSVTHDIPHRTATQDWVLWDVDVVEIHVRHSPTTQKNEEMAAVLENLKQPSAPPLPRAEEEEENLDERFGMSNAPSSRKHAKSGSFLRQWSNMSGGSSPKVEGRTIYYHVAEDNGEVTDEGAGYSLNFKGNGVEELTRKFEEETGLEGIIVCNRSPLNGKLYPLRLQLPPNNVTMQVVLVLPYSQVARDFEAQGLI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0303 536 Pfam Domain of unknown function (DUF569) 218 359 IPR007679 -
Amo15g0303 536 Pfam Domain of unknown function (DUF569) 1 150 IPR007679 -
Amo15g0303 536 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 201 - -
Amo15g0303 536 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 211 522 - -
Amo15g0303 536 SUPERFAMILY Actin-crosslinking proteins 221 364 IPR008999 -
Amo15g0303 536 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 201 - -
Amo15g0303 536 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 211 522 - -
Amo15g0303 536 MobiDBLite consensus disorder prediction 416 439 - -
Amo15g0303 536 Gene3D - 5 139 - -
Amo15g0303 536 MobiDBLite consensus disorder prediction 388 439 - -
Amo15g0303 536 Gene3D - 226 346 - -
Amo15g0303 536 SUPERFAMILY Actin-crosslinking proteins 6 155 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0303 Amo-Chr15 10990382 10998448 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0303 - - adu:107489118 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0303 15 10990382 10998448 Amo15g0303 15 10990382 10998448 ECH
Amo15g0303 15 10990382 10998448 Amo05g1655 05 31745096 31753912 PCT
Amo15g0303 15 10990382 10998448 Amo15g0299 15 10812273 10821314 PCT
Amo05g1655 05 31745096 31753912 Amo15g0303 15 10990382 10998448 PCT
Amo15g0299 15 10812273 10821314 Amo15g0303 15 10990382 10998448 PCT