Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1655 ATGGAGTTTTTCACCAAGGCAAAAGCCGTTAAGCTCCGCAGCCACCTCGACAAGTACCTCGTGGCGGACCGGGACCTCGAGAAAGTCCACCAGAGCCGAAAAGGCGACACAAGAAGGGCCAAATGGATCGTTGAAGTCGTGAACGATGACGACATCAACGGCGGCGGCGGCAGCCACCGCGTCCGGCTGAAGAGCTGCCACGGGAGGTATCTTGCCGCTACGGAAACCCCTTTCCTCCTTGGGATGACCGGAAACAGGGTGGTCCAGGCAGAGTTTGACAACAGCCTCAGTTGGAAGTTCGAGTGGGAACCGGTTCGAGACGGTTTCCAGGTCAGGCTCCGGAGCTGGTGCGGGAAGTTTCTCAGAGGGAACGGTGCGACTCTTCCGTGGAGGAACACCGTCACTCACGACGACCCTGTTGCAGGAATTTCAAGTGGTTGGGTCCTATGGGATGTTGAGGCTGTGGAATTGCCGGAAGAAGAGGAAGATGATGAGGTGGATGAGTATGCTTCTTTGGCTTTCTCCGATGAGTTTTTCGCCCCTTCAGACCCGCCGTCGCCGATGTCCGTTTTCTCCCTCAAGTCTCCGCCAGTGAGGCAGGCCTCCAAGTTGGGTCAGAAAACGACCTCAAACAACAAATTCCGAAACGGCATGGATTTCTTCCGGCACGCAAAGGCGGTGCGCCTCCGCAGCCACCATGACAAGTACCTCATAGCGGAGGACGACGAGGAAACCGTTACGCAGGACCGCAACGGTGCCTCCAAGAGTGCCAGGTGGCACGTAGAGTACGTGGACAGTTACGACAACATAATCCGCCTCAAAAGCTGTTACGGAAAGTACCTAACCGCCTCAACAAACCCGTTCCTCCTTGGCATGACGGGGAGGAAGGTTCTCCAGACGCTACCTTCCAGATTGGACTCTTCAGTTGAATGGGAACCGGTTAAGGACGGTGGGCGCGTGAAGCTGAAGACGCGCTATGGGAACTTTTTGAGGGCAAATGGTGGTGTTCCTCCGTGGAGGAACTCCGTGACTCATGATATTCCGCATAGGACGGCCACGCAGGATTGGGTMCTTTGGGATGTTGATGTGGTGGAGATTCATGTTCGTCAWTCTCCGACWACTCAMAAGAATGAAGAGATGGCGGCGGTGWTGGAGAATCTCAAGCAGCCTTCTGCTCCGCCGTTGCCGAGYGCGGAGGAGGAGGAGGAGAATCTTGATGAGAGGCTTGGAATGAGCAACGCCCCGTCATCTCGTAAGCACGCCAAGTCTGGAAGCTTCTTGAGGCAGTGGAGTAATATGAGTGGCGGGTCGTCACCCAAGGTGGAAGGAAGAACCATATACTACCATGTTGCTGAAGACAATGGAGAAGTAACTGATGAAGGCGCAGGGTATTCCTTGAATTTCAAGGGTAATGGAGTTGAAGAACTAACTCGTAAGTTTGAGGAAGAGACAGGTCTAGAGGGTATCATTGTGTGTAATAGGAGTCCATTGAATGGAAAACTATATCCTCTTCGCTTGCAGCTTCCTCCAAACAATGTRACCATGCAAGTTGTCCTTGTTCTTCCTTATTCACAAGTGGCAAGAGACTTTGAGGCACAAGGTTTAATTTGA 1611 0.5301 MEFFTKAKAVKLRSHLDKYLVADRDLEKVHQSRKGDTRRAKWIVEVVNDDDINGGGGSHRVRLKSCHGRYLAATETPFLLGMTGNRVVQAEFDNSLSWKFEWEPVRDGFQVRLRSWCGKFLRGNGATLPWRNTVTHDDPVAGISSGWVLWDVEAVELPEEEEDDEVDEYASLAFSDEFFAPSDPPSPMSVFSLKSPPVRQASKLGQKTTSNNKFRNGMDFFRHAKAVRLRSHHDKYLIAEDDEETVTQDRNGASKSARWHVEYVDSYDNIIRLKSCYGKYLTASTNPFLLGMTGRKVLQTLPSRLDSSVEWEPVKDGGRVKLKTRYGNFLRANGGVPPWRNSVTHDIPHRTATQDWVLWDVDVVEIHVRXSPTTXKNEEMAAVXENLKQPSAPPLPSAEEEEENLDERLGMSNAPSSRKHAKSGSFLRQWSNMSGGSSPKVEGRTIYYHVAEDNGEVTDEGAGYSLNFKGNGVEELTRKFEEETGLEGIIVCNRSPLNGKLYPLRLQLPPNNVTMQVVLVLPYSQVARDFEAQGLI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1655 536 Gene3D - 226 346 - -
Amo05g1655 536 MobiDBLite consensus disorder prediction 386 423 - -
Amo05g1655 536 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 201 - -
Amo05g1655 536 Gene3D - 5 139 - -
Amo05g1655 536 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 211 522 - -
Amo05g1655 536 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 211 522 - -
Amo05g1655 536 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 201 - -
Amo05g1655 536 SUPERFAMILY Actin-crosslinking proteins 221 364 IPR008999 -
Amo05g1655 536 Pfam Domain of unknown function (DUF569) 1 150 IPR007679 -
Amo05g1655 536 Pfam Domain of unknown function (DUF569) 218 359 IPR007679 -
Amo05g1655 536 SUPERFAMILY Actin-crosslinking proteins 6 155 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1655 Amo-Chr5 31745096 31753912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1655 - - adu:107489118 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1655 05 31745096 31753912 Amo15g0299 15 10812273 10821314 hybridization
Amo15g0303 15 10990382 10998448 Amo05g1655 05 31745096 31753912 PCT
Amo05g1655 05 31745096 31753912 Amo15g0303 15 10990382 10998448 PCT