Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3773 ATGGGAATCCCTCACTTTCTTGCAATACCATTTCCAGTGCTAGGACACATTAATCCCCTTACACAACTCTCTAATGTTCTAGCCAAACATTATGGTTGCAAGGTCACATTTCTCAACTCTGAATTCAACCACAAAAGAGCAAAAATTGATGATCATGATGAGGAATCATCATCAAAGATGATTAAGTTTGTGACACTCCCTGATGGTTTGGACCATGAAGATGATAGAAGTGACCTTAGCAAGGTTCTTCATTCCATCAAAAGCACCATGCCTTCTTTGCTTCCAAAGCTCATACAAGATATCAATGCTTTGGATTTTGAGAACAAGATCACTTGTATTCTTGTGACAGTTAATATGGGTTGGGCCTTGGAAATTGGTCACCAATTGGGAATTAAAGGTGCTGCTTTTTCCCCCTTCTCTGCTACTTCTTTGGCTTCAATTCATTTCATTCCTAAGCTCATGGAGGATGGAATTATAGATTCAGATGGAAACCCCATCAAATCACAAGAAATTCAAATTGCCCCAAATATGCCAAAGATGAACCCTAAACATGTCTTATGGTGTAATTTAGGCAATGAGTTCTTCAAGCACCTTGTGCAAGAAATGAAAACTATGGAGTTATTAGCAGAGTGGTGCCTTTGTAATAGTGCCTATGATCTTGAGCCAGGAGCATTATCCATATCACCAAGGTTCCTATCAATTGGACCATTGATGGAAAGTGACAACAATAACAACAACAAAAGTTCTTCATTTTGGCAAGAGGACACAACATGCTTAGAATGGTTGGACCAACAACAACCTCAATCTGTTGTATATGTTTCATTTGGTAGCTTAGCTGTATTGGAATCCAACCAATTCAAAGAACTAGCACTTGCACTTGATCTCATTGACAAGCCTTTTCTTTGGGTTGTAAGACCAGGTATTAATGATGATAAAAATAATGCATTTCCAAATGAATTTCATGGAAATAAAGGTGTATATAGTGGAGTATCCTTCTTGTGTTGGCCATTTTTTATTGATCAGTTTTGGAATAAATCATATATTTGTGATGTGTGGAAAGTTGGAATGGAATTAGTCAAGGATGAAAATGGATTCATATCAAAAGAAGAGATAAGGAAGAAGGTGGAGCAATTACTTGGTGATGAAGGCATAAGAGAAAGGTCTTCAAAATTGAAGGAAGTGACTAGGAAAAACCTAGGACACATTAATCCCCTAACACAATTCTCTAATGTTCTAACCAAACATGGTTGCAAGGTCACTTTCCTACACACTGAGTTCAGCCACAAAAGGGCTAAAATTTCTGCTGGTTATGCAGAAGACAACAACCTCAAAGGTTGTTCAAACATAAATTTTGTGACTCTCCCAGATGGTTTGGACCCTGAAGATGATAGAAGTGATATTGTGAAATTGCTTGTCTCTATGGAAAGATCCATGCCTCTTTTGCTTCCAAAGCTCATAGAAGATATCAATACCTTGGATGTTAATAATAAAATCACTTGCATTGTTGTCACAATTAGTATGGGTTGGGCCTTGCAAGTTGCTCACAAATTTGGAATCAAAGGAGCTTTTCTCTTTCCATTCTCAGCAACTACTTCAGCCTCCCTTTATTGTATCCCAAGATTCATGCATGATGGAATTATTGATTCAGATGGAATCCCCACCAAGAAACAAGAAATTCAACTTTCCCCAAATATGCCTATGATGGACACAAAAAATTTACCATGGGTTAGCCTAGGTAAGATTTTCTTTGATAATATTGTGCAAGATGTGATGCATAATATGGAATTAGCAGAGTGGTGGCTTTGCAATAGTGCCTATGATCTTGAGCCAGGAGCATTCTCCATATCACCAAAGTTTCTACCAATTGGACCATTGATTGAAAGTGACAACAACAACAACAACAAAAGCTCCTCATTCTGGCAAGAAGACACAACATGCTTAGAATGGTTGGATCAACAACAACCTCAATCTGTTGTATATGTTTCATTTGGTAGCTTGGCAGTTATGGAATCCAAGCAACTCAAAGAATTAGCACTTGCACTTGATCTCATTGACAAGCCTTTTCTTTGGGTTGTAAGAACAAGTAATGATGATAACAAGGGAAATAACACATACCCAAATGAATTTCATGGAAGTAAAGGTAAAATTGTTAGTTGGGCACCACAGAAAAAAGTACTGAACCATTCTGCAATTGCTTGTTTCATAAGTCATTGCGGTTGGAATTCAGTTGTTGAAAGTGTGTCCAGTGGTGTACCATTCTTGTGTTGTCCATTTTTCAGTGATCAATTTTGGAACAAGTCATACATTTGTGAGGTGTGGAAAGTTGGAATTGGATTAGACAAAGATGAAAATGGATTCATATCAAAAGAAGAGATAAGGAAGAAGGTTGAGCAATTGCTTCAAGATGAAACCATAAAGGAAAGGTCTTTGAAATTGAAGCAAGTGATAAGGAACAACTTAGTTGAAGCTGGCCAGTCTTCAAAAAATCATCAAATGTTTATCAATTGGGCAAAATGA 2517 0.3739 MGIPHFLAIPFPVLGHINPLTQLSNVLAKHYGCKVTFLNSEFNHKRAKIDDHDEESSSKMIKFVTLPDGLDHEDDRSDLSKVLHSIKSTMPSLLPKLIQDINALDFENKITCILVTVNMGWALEIGHQLGIKGAAFSPFSATSLASIHFIPKLMEDGIIDSDGNPIKSQEIQIAPNMPKMNPKHVLWCNLGNEFFKHLVQEMKTMELLAEWCLCNSAYDLEPGALSISPRFLSIGPLMESDNNNNNKSSSFWQEDTTCLEWLDQQQPQSVVYVSFGSLAVLESNQFKELALALDLIDKPFLWVVRPGINDDKNNAFPNEFHGNKGVYSGVSFLCWPFFIDQFWNKSYICDVWKVGMELVKDENGFISKEEIRKKVEQLLGDEGIRERSSKLKEVTRKNLGHINPLTQFSNVLTKHGCKVTFLHTEFSHKRAKISAGYAEDNNLKGCSNINFVTLPDGLDPEDDRSDIVKLLVSMERSMPLLLPKLIEDINTLDVNNKITCIVVTISMGWALQVAHKFGIKGAFLFPFSATTSASLYCIPRFMHDGIIDSDGIPTKKQEIQLSPNMPMMDTKNLPWVSLGKIFFDNIVQDVMHNMELAEWWLCNSAYDLEPGAFSISPKFLPIGPLIESDNNNNNKSSSFWQEDTTCLEWLDQQQPQSVVYVSFGSLAVMESKQLKELALALDLIDKPFLWVVRTSNDDNKGNNTYPNEFHGSKGKIVSWAPQKKVLNHSAIACFISHCGWNSVVESVSSGVPFLCCPFFSDQFWNKSYICEVWKVGIGLDKDENGFISKEEIRKKVEQLLQDETIKERSLKLKQVIRNNLVEAGQSSKNHQMFINWAK* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3773 838 ProSitePatterns EF-hand calcium-binding domain. 780 792 IPR018247 -
Amo14g3773 838 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 648 818 IPR002213 GO:0008194
Amo14g3773 838 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 399 836 - -
Amo14g3773 838 Gene3D Glycogen Phosphorylase B; 400 829 - -
Amo14g3773 838 Gene3D Glycogen Phosphorylase B; 3 256 - -
Amo14g3773 838 Gene3D Glycogen Phosphorylase B; 257 323 - -
Amo14g3773 838 PANTHER EG:EG0003.4 PROTEIN-RELATED 1 325 - -
Amo14g3773 838 PANTHER EG:EG0003.4 PROTEIN-RELATED 399 838 - -
Amo14g3773 838 CDD GT1_Gtf-like 400 823 IPR002213 GO:0008194
Amo14g3773 838 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 1 325 - -
Amo14g3773 838 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 399 838 - -
Amo14g3773 838 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 324 398 - -
Amo14g3773 838 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 397 - -
Amo14g3773 838 CDD GT1_Gtf-like 4 400 IPR002213 GO:0008194
Amo14g3773 838 Gene3D Glycogen Phosphorylase B; 325 397 - -
Amo14g3773 838 Gene3D Glycogen Phosphorylase B; 634 818 - -
Amo14g3773 838 PANTHER EG:EG0003.4 PROTEIN-RELATED 324 398 - -
Amo14g3773 838 ProSiteProfiles EF-hand calcium-binding domain profile. 779 802 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3773 Amo-Chr14 142855657 142860139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3773 400 838 Glycosyltransferase AT3G02100 40.402 1.98e-112 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3773 - - gmx:100800937 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3773 14 142855657 142860139 Amo20g3419 20 143555533 143557794 PCT
Amo14g3773 14 142855657 142860139 Amo10g2844 10 93455397 93459241 PCT