Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3762 ATGGTGAAGATTTGCTGCATTGGTGCTGGATATGTTGGGGGTCCTACAATGGCAGTCATTGCACTGAAGTGCCCATCCATTGAAGTCGCTGTTGTCGATATCTCCAAACCCCGTATTGCAGCCTGGAATAGCGACCAGCTTCCCATCTATGAGCCCGGCCTTGATGCAGTTGTGAAGGAATGCCGCGGCAGGAACCTCTTCTTTAGCACTGATGTTGAAAAGCATGTGTTTGAGGCTGACATTGTGTTTGTCTCCGTCAACACCCCAACGAAAACTCAGGGTCTTGGAGCCGGCAAAGCAGCCGATTTGACCTATTGGGAGAGCGCTGCTCGCATGATTGCTGATGTCTCAAAGTCAGACAAAATCGTTGTTGAGAAATCCACTGTCCCTGTCAAGACTGCTGAGGCTATAGAGAAAATTTTGACTCACAATAGCAAGGGAATCAAGTTCCAGATCCTGTCAAACCCGGAATTCCTTGCTGAGGGAACTGCAATCGAAGACCTTTTCAAGCCAGACCGTGTCCTTATCGGTGGCCGGGAGACCCCAGAAGGCCAGAAAGCTCTCCAAACATTGAAGGAAGTTTATGCTCACTGGGTCCCTGAAGAGAGAATCCTAACCACTAACCTGTGGTCTGCTGAGCTGTCTAAGCTTGCTGCCAATGCCTTCTTGGCGCAGAGGATTTCATCTGTTAATGCAATGTCGGCGCTTTGCGAGGCTACCGGGGCAAATATCCAGCAGGTGTCCTTTGCTGTCGGTACTGACACAAGAATTGGACCCAAGTTCCTCAATGCCAGTGTTGGATTTGGTGGATCCTGCTTCCAGAAGGATATCCTGAACCTTGTCTACATCTGCGAGTGCAACGGCCTTCCTGAGGTGGCCGAGTACTGGAAGCAAGTCATCAAGATCAATGATTACCAGAAGAGCCGGTTCGTGAACCGTGTAGTCTCATCCATGTTCAACACTGTCTCAAGCAAGAAGGTTGCCATTCTTGGATTCGCCTTCAAGAAAGATACCGGTGACACAAGGGAGACCCCGGCCATTGACGTGTGCAAGGGGCTACTTGGCGACAAGGCCAACCTAAGCATATATGATCCACAGGTAACCGAGGACCAAATCCAGAGGGATCTGTCGATGAACAAGTTCGATTGGGACCATCCGATCCACTTGCAGCCGACTAGTCCTTCTACCGTGAAGAAAGTGAGTGTGGTTTGGGATGCATATGAAGCCACAAAGGATGCACATGGAATCTGCATTCTTACTGAGTGGGATGAGTTCAAGACCCTTGATTACCAGAGGATCTATGAGAACATGCAGAAGCCAGCATTTGTTTTTGATGGAAGAAACATTGTTGATGCTGATAAGTTGCGTGATATTGGATTCATTGTTTACTCAATTGGTAAGCCACTTGATGCTTGGCTCAAGGACATGCCTGCTGTGGTGGCATAG 1446 0.4896 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKPRIAAWNSDQLPIYEPGLDAVVKECRGRNLFFSTDVEKHVFEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPEGQKALQTLKEVYAHWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANIQQVSFAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVSSKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPSTVKKVSVVWDAYEATKDAHGICILTEWDEFKTLDYQRIYENMQKPAFVFDGRNIVDADKLRDIGFIVYSIGKPLDAWLKDMPAVVA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3762 481 Gene3D - 209 240 - -
Amo14g3762 481 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 479 IPR028356 GO:0003979
Amo14g3762 481 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Amo14g3762 481 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 202 IPR036291 -
Amo14g3762 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Amo14g3762 481 Gene3D - 241 478 - -
Amo14g3762 481 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Amo14g3762 481 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 479 - -
Amo14g3762 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 IPR001732 GO:0016616|GO:0051287
Amo14g3762 481 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
Amo14g3762 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Amo14g3762 481 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Amo14g3762 481 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Amo14g3762 481 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Amo14g3762 481 Gene3D - 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3762 Amo-Chr14 142785718 142788664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3762 K00012 - gmx:548074 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3407 20 143345236 143348120 Amo14g3762 14 142785718 142788664 PCT
Amo10g2750 10 92188548 92191486 Amo14g3762 14 142785718 142788664 PCT
Amo14g3762 14 142785718 142788664 Amo20g3407 20 143345236 143348120 PCT
Amo14g3762 14 142785718 142788664 Amo10g2750 10 92188548 92191486 PCT