Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3390 ATGGCTTCTCTTGCAACCCTTTATGGCTTCCATCATGGTTCTCTTCTAAGAACTCAGTTCCTAGGCCAAGATCATAACCTCACACACTACCCTCTAAAGCACCCTTCATATCATCACAACAAACCAAGTTTTGAACCTCATGCCAAGTTCAACATAGTTGAGATCATGGGAGGGAGAGGGATATGCAATGGAGAAAAAGGTCTTCAACAAGAGCTTGAAAGGCAAGTGGTTGAAAGCCGGCAACAAGCGCAACCGCGGCTGCAACCGGATAGTGGTGGCGAAGAGGAGGAGGAGGAGGAAGAGAACTTTGAGGTATCAGAAGATGCTTTTGAGAAGGAAATGATGGGGCTAACTGGTGGGTTTCCTGGTGGTGAGAAAGGGTTGCAGAAGTTCATTGAAGAAAATCCACCTTCCAAATCCAAACATGGAACTCTTCTTGCCTTAATTATAAGAAAATATCAAACAGATATTAAAGAGAGAATGTGTCTGTCATCTTCAGAATATGTGCTTGATAAGAAGCAGCAAAACAAAAATGCCTCAGCATTCCTATTGGAAACTAGATTTTCTTCTGGCTAG 576 0.4306 MASLATLYGFHHGSLLRTQFLGQDHNLTHYPLKHPSYHHNKPSFEPHAKFNIVEIMGGRGICNGEKGLQQELERQVVESRQQAQPRLQPDSGGEEEEEEEENFEVSEDAFEKEMMGLTGGFPGGEKGLQKFIEENPPSKSKHGTLLALIIRKYQTDIKERMCLSSSEYVLDKKQQNKNASAFLLETRFSSG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3390 191 MobiDBLite consensus disorder prediction 77 105 - -
Amo14g3390 191 PANTHER NADH DEHYDROGENASE-LIKE COMPLEX, SUBUNIT S-RELATED 1 141 - -
Amo14g3390 191 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 141 IPR021659 GO:0009767
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3390 Amo-Chr14 136418495 136419520 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3390 K00345 - lja:Lj1g3v2627410.1 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3390 14 136418495 136419520 Amo12g0470 12 7612977 7613911 PCT
Amo14g3390 14 136418495 136419520 Amo02g0617 02 7976532 7977424 PCT
Amo12g0470 12 7612977 7613911 Amo14g3390 14 136418495 136419520 PCT
Amo02g0617 02 7976532 7977424 Amo14g3390 14 136418495 136419520 PCT