Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0617 ATGTCTTCCACCTTTGTTGCTCTTCATAGTTCTCTTCTTCAATCCCAGTTTCTAGGCCAAGATGGCCTCACTCATCTCTACCATTCCAAATCCACCATTCACACAAAACCAAAAGCATACAAAGTATGTGCCAAATTTGACATGCTGCAAATCATGGGAGGTAGAGGACTATGCAATGGAGAAGAAGGCCTTATACAAGAGCTGAAAAGACAAGTTGAGAATCCACCATCACCATCATCATCAGAACAAGAACAAGAGAATTTAGCACTGGCCAATGTTGCAGCAGAAGATGGTTTTGAGAAAGAGTTGATGGGGCTAACAGGTGGCTTCCCCGGTGGCGAAAAAGGCTTGAAGAAGTTCATCATGGAGAACCCTCCTCCTAAAAAAGGTGATGGAATCCAAAGCTTGAAACTTTCGATGGCGAAGAAGCCAAAGCCACCGGAGCTTCCTCTTCTGCTTCCAGGAATGATCGCTATTGTGAGCAATCCGAATAATCCGTATTACATGTACTGTGGCATTGTTCAAAGGATCACTGATGGAAAAGCAGGGGTTCTGTTTGAAGGAGGGAACTGGGACAGGTTAATCACATTCAGGCTTGAGGAATTGGAGAGAAGAGAAAAGGGTCCTCCAATGAAGAATCCAAAGTCTTGTGTTCTTGAACCGTTTCTTGAGAAGAAATCATGA 684 0.4386 MSSTFVALHSSLLQSQFLGQDGLTHLYHSKSTIHTKPKAYKVCAKFDMLQIMGGRGLCNGEEGLIQELKRQVENPPSPSSSEQEQENLALANVAAEDGFEKELMGLTGGFPGGEKGLKKFIMENPPPKKGDGIQSLKLSMAKKPKPPELPLLLPGMIAIVSNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMKNPKSCVLEPFLEKKS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0617 227 Pfam NAD(P)H dehydrogenase subunit S 152 203 IPR021659 GO:0009767
Amo02g0617 227 MobiDBLite consensus disorder prediction 205 227 - -
Amo02g0617 227 Gene3D - 147 216 - -
Amo02g0617 227 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 3 226 IPR021659 GO:0009767
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0617 Amo-Chr2 7976532 7977424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0617 K00345 - gmx:100527145 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0470 12 7612977 7613911 Amo02g0617 02 7976532 7977424 hybridization
Amo14g3390 14 136418495 136419520 Amo02g0617 02 7976532 7977424 PCT
Amo02g0617 02 7976532 7977424 Amo14g3390 14 136418495 136419520 PCT