Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3382 ATGGCAGAGGCAAATCTAAGATATGCTGTTGTTACAGGGTCAAACAAGGGGATAGGATTTGAGACAGTTAAAGAGTTGGCCTCAAATGGAATCAAGGTGGTGCTCACTGCAAGAGATGAGAGTAAGGGTATTGAAGCCATTGAGAAGCTCAAAGAGTGTGGTGTCTCTGATAAGCTTGTGGTTCTTCACCAACTTGATGTCACTGACCATGCTAGCATTGCATCATTAGCGGAGTTTGTTAAGACACAGTTCCCGAGACTTGATATATTGGTGAATAATGCAGGAATCAGTGGTGTCAATCCATATGAAAAGGATGAACCAACATTTAAATGGGAGGAACTAACACAAACTTATGAGATGGCTGAAAAGTGTATATTGACAAACTACTATGGTGCCAAGAAAACAACTGAGACATTTCTTCCACTACTTCAGTTATCAAACTCACCAAGGGTTGTTAATGTTTCCTCTGAAGCAGGGTTGTTAAAGAACATATCAAACAAATGGGCTAAGGAGGTGCTTGGTGATGCTGAAAACCTTAGAGAAGAGAAAATAGATGAGGTGCTCAAGGAGTTCCTCAAAGACTTCAAAGAAGGCATACTAGAAATCAAAGGCTGGCCAATTAACATGAGTGCCTATAGGGTCTCAAGAGCAGCAATGAATTCTTATACAAGATTCATGGCAAAGAAGCACCAAAACCTGGGCATCAATTGTGTGTGCCCTGGTCCTTGCAAAACAGACATAACCAGAAACACTGGTACTCTTTCTGCTACTGAAGGTGCTGCAAGTGTTGTGAGATTAGCACTTCTACCTGATGGCTCACCTTCTGGCCTTTTCTTTATTAGAAAAGAGTTGTCAAGGTCAAACAGAGGGATAGGATTTGAGACAGTTAAGGAATTGGCCTCAAATGGAATCAAGGTGGTTCTCACAGCAAGAGATGAGAAGAAAGGCAATGAAGCCATTGAAAAATTGAAAGATTTTGGTCTCTCTGACTTTGTGGTTCTTCACCAGCTTGATGTCACTGACCATGTTAGCATTTCATCTTTGGTACAATTTGTTAGCACACACTTTGGGAGACTTGATATATTGGTGAACAATGCAGGAATAAGTGGTGTGAATCCAGATGAAAAGGGGGAAGCAACAATCATCTGGGAAGAACTGACTCAAACTTATGAAATGGCTGAAAAGTGCATATTGACAAATTACTATGGTGCTAAGGACACAACTGAGGCATTTCTACCCCTTCTCAAGTTATCCGATTCACCTATTATCGTTAATGTTTCCTCGCGAGGAGGATTGTTAAAGCACATATCAAACAAATGGGCAAAAGGGGTGCTAGATGATGATGAGAATCTAACAGAAGAGAGAATAGATGAGGTGTTGAAGGAGTTTATGGAAGACTTCAAAGCAGGTTTGATAGAAAGGAATGGCTGGCCAACCTTGTTATCTGCAAATAGAGTATCAAAAGCAGCATTGAATTCTTACACAAGAATTCTGGCAAAGAAGCATCCAAACTTGTGCATCAATTGTCTCTGCCCTGGTTTTGTGAAAACAGACATAAATAGGAACACTGGAATCTTATCTGTCACTGAAGGTGCTGCAAGTGTTGTCAGATTAGCACTTCTATCTCATGGTTCCCCTTCTGGCCTTTTCTTTATTAGGCAAGAATTGTCAACTTTTTAA 1680 0.406 MAEANLRYAVVTGSNKGIGFETVKELASNGIKVVLTARDESKGIEAIEKLKECGVSDKLVVLHQLDVTDHASIASLAEFVKTQFPRLDILVNNAGISGVNPYEKDEPTFKWEELTQTYEMAEKCILTNYYGAKKTTETFLPLLQLSNSPRVVNVSSEAGLLKNISNKWAKEVLGDAENLREEKIDEVLKEFLKDFKEGILEIKGWPINMSAYRVSRAAMNSYTRFMAKKHQNLGINCVCPGPCKTDITRNTGTLSATEGAASVVRLALLPDGSPSGLFFIRKELSRSNRGIGFETVKELASNGIKVVLTARDEKKGNEAIEKLKDFGLSDFVVLHQLDVTDHVSISSLVQFVSTHFGRLDILVNNAGISGVNPDEKGEATIIWEELTQTYEMAEKCILTNYYGAKDTTEAFLPLLKLSDSPIIVNVSSRGGLLKHISNKWAKGVLDDDENLTEERIDEVLKEFMEDFKAGLIERNGWPTLLSANRVSKAALNSYTRILAKKHPNLCINCLCPGFVKTDINRNTGILSVTEGAASVVRLALLSHGSPSGLFFIRQELSTF* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3382 559 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 287 559 - -
Amo14g3382 559 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 4 285 - -
Amo14g3382 559 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 273 IPR036291 -
Amo14g3382 559 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 421 429 IPR002347 -
Amo14g3382 559 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 357 368 IPR002347 -
Amo14g3382 559 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 484 503 IPR002347 -
Amo14g3382 559 Pfam short chain dehydrogenase 289 433 IPR002347 -
Amo14g3382 559 Pfam short chain dehydrogenase 8 163 IPR002347 -
Amo14g3382 559 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Amo14g3382 559 PRINTS Glucose/ribitol dehydrogenase family signature 212 231 IPR002347 -
Amo14g3382 559 PRINTS Glucose/ribitol dehydrogenase family signature 231 248 IPR002347 -
Amo14g3382 559 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
Amo14g3382 559 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Amo14g3382 559 Gene3D - 4 286 - -
Amo14g3382 559 Gene3D - 287 559 - -
Amo14g3382 559 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 288 541 IPR036291 -
Amo14g3382 559 CDD carb_red_PTCR-like_SDR_c 7 284 IPR045313 GO:0016616
Amo14g3382 559 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 287 559 - -
Amo14g3382 559 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3382 Amo-Chr14 136266948 136274087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3382 288 433 Miscellaneous Gene Families AT2G29150 33.108 3.09e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3382 K15095 - jre:109004875 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3382 14 136266948 136274087 Amo14g3382 14 136266948 136274087 ECH
Amo14g3382 14 136266948 136274087 Amo12g0460 12 7480727 7484075 PCT
Amo12g0463 12 7515844 7551039 Amo14g3382 14 136266948 136274087 PCT