Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0463 ATGGAACAAGCGCCAGAGGTAAAATATGCAGTTGTGAGTGGAGCAAACAAAGGAATTGGAATAGAAATAGTAAGGCAATTAGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCTTTGGAAACTCTCAAAGATCTCTCTCATCTTGTCCTCTTTCACCAGCTTCATGTTGCTGATCCTGCTAGTGTGGATTCTCTTGCAAATTTCATCAAATCCGAATTTGGAAAACTCCACATTTTGATCAACAATGCAGGGATTGGTGGACTTGTGATTAAGGACAATGATTTGGTCCCTCAAGTGTTATTGAAAAGCAGGGAATTATCAGATGATGTAATAGAGAAAGCCGGAATCGTTCAAACATTCGAGCTAGATGAAGAATGCTTGCAAATAAATTATTATGGTGCTAAAAGAATATCTGAAGCCCTTCTCCCTCTTCTCCAATTATCTGAATCACCAAGAATTATGAATGTATCATCCTCCCTAGGAAAGTTAAAGAGAGTTGATGAAGTGTTGAATGAATTTCTGAAAGATTTCAAAGAAGGGTGTTTAGAAAGAAAAGGATCGCCTAAGGTTCTTGGTGCCTATATTCTCTCAAAAGCTGCTATGAATGCATATACAAAATTGTTGCTAAAAAAAGGGTGTTTAGAAAGAAAAGGATGGCCTAAGGTTCTTGGTGCCTATATTATCTCAAAAGCTGCAATGAATGCATATACAAGAATTGTTGCTAAAAAGTACCCTACTATATGCATCAATAGTGTGTGTCCAGGTTATGTTAAAACTGATATAACTGCCAATACTGGATTTTTAACGGCAGAAGAAGGTGCTGCTAGTCCTGTCAAATTAGCATTGCTTTCAAATGCCTCTTCTGGCCTTTTCTATTCTCAGAATGAATTGTGTGGAACATCAGATGTAAAGTATGCAGTTGTGACCGGAGCAAATAAAGGAATTGGATTAGAAATAGTAAGGCAATTGGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAAAAGAGAGGCCTTCATGCATTGGAGACACTCAAAGATCTCTCTGATTTTGTGCTTTTTCACCAGCTTGATGTTGCTGATCCTGCAAGTGTTGCTTCTCTTGCAGATTTCATCAAATCCAAATTTGGCAAACTTGATATTCTGGTTAACAATGCAGGGGTTAGTGGAGTTGTGATTAAAGACACTGATTTACTCCCTTCATTAATAATGAAAGGCGAGGAATTATCTGAGGATGAAATAGAAAAGACAAGGAGTCAAACATATGAATTAGCACAAGATTGTTTTCAAATAAATTATTATGGTGCTAAAAGAACTTCCGAATCTCTTCTTTCCCTGCTCCAGTTATCTGATTCACCAAAAATCGTGAATGTATCATCTTTTTTGGGAAAGTTAAAGTGTGTATTAAATGAATGGGCTAAAGGGGTGTTCAATGACGCTGATAACCTTACAGAAGAGAAAATAGATATGGTATTGAATGAGTTTCTAAAAGATTTCAAAGAAGGGAGATTAGAAAGCAAAGGATGGCCTAAGGCTGCTAGTGCTTACATTCTCTCGAAAGCTGCTTTGAATGCATATACAAGAATTCTTGCTAAGAAGTTCCCTACATTTTGCATCAATAGTGTGTGTCCTGGTTATGTTAAAACTGATATGACTGCAAATACTGGCTTCATAACTGTGGAAGAAGGTGCTGCTAGTCCTGTGAGGTTGGCACTACTTCCAAATGGTAGTCCTTCTGGCTTCTTTTATGATCGGAGTCAAATCTCTTTCTATTAA 1809 0.3759 MEQAPEVKYAVVSGANKGIGIEIVRQLASNGVKVVLTSRDEKRGLHALETLKDLSHLVLFHQLHVADPASVDSLANFIKSEFGKLHILINNAGIGGLVIKDNDLVPQVLLKSRELSDDVIEKAGIVQTFELDEECLQINYYGAKRISEALLPLLQLSESPRIMNVSSSLGKLKRVDEVLNEFLKDFKEGCLERKGSPKVLGAYILSKAAMNAYTKLLLKKGCLERKGWPKVLGAYIISKAAMNAYTRIVAKKYPTICINSVCPGYVKTDITANTGFLTAEEGAASPVKLALLSNASSGLFYSQNELCGTSDVKYAVVTGANKGIGLEIVRQLASNGVKVVLTSRDEKRGLHALETLKDLSDFVLFHQLDVADPASVASLADFIKSKFGKLDILVNNAGVSGVVIKDTDLLPSLIMKGEELSEDEIEKTRSQTYELAQDCFQINYYGAKRTSESLLSLLQLSDSPKIVNVSSFLGKLKCVLNEWAKGVFNDADNLTEEKIDMVLNEFLKDFKEGRLESKGWPKAASAYILSKAALNAYTRILAKKFPTFCINSVCPGYVKTDMTANTGFITVEEGAASPVRLALLPNGSPSGFFYDRSQISFY* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0463 602 PRINTS Glucose/ribitol dehydrogenase family signature 527 546 IPR002347 -
Amo12g0463 602 PRINTS Glucose/ribitol dehydrogenase family signature 314 331 IPR002347 -
Amo12g0463 602 PRINTS Glucose/ribitol dehydrogenase family signature 458 474 IPR002347 -
Amo12g0463 602 PRINTS Glucose/ribitol dehydrogenase family signature 546 563 IPR002347 -
Amo12g0463 602 PRINTS Glucose/ribitol dehydrogenase family signature 388 399 IPR002347 -
Amo12g0463 602 Pfam short chain dehydrogenase 313 476 IPR002347 -
Amo12g0463 602 Pfam short chain dehydrogenase 8 173 IPR002347 -
Amo12g0463 602 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 8 220 - -
Amo12g0463 602 Gene3D - 2 218 - -
Amo12g0463 602 Gene3D - 219 308 - -
Amo12g0463 602 Gene3D - 309 602 - -
Amo12g0463 602 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 219 305 - -
Amo12g0463 602 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 220 - -
Amo12g0463 602 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 313 601 - -
Amo12g0463 602 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 388 399 IPR002347 -
Amo12g0463 602 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 464 472 IPR002347 -
Amo12g0463 602 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 527 546 IPR002347 -
Amo12g0463 602 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 219 305 - -
Amo12g0463 602 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 313 601 - -
Amo12g0463 602 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 313 588 IPR036291 -
Amo12g0463 602 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 291 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0463 Amo-Chr12 7515844 7551039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0463 313 563 Acyl Lipid Metabolism Gene Families AT1G63380 25.670 6.14e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0463 K15095 - sind:105174340 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0463 12 7515844 7551039 Amo14g3382 14 136266948 136274087 PCT