Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3341 ATGGCCAAGGAAGAACAAGTGTTTGAGTTCCTCGGGTGTGTTCCTCTGCTACAGAGACTTCCTAGCTCCTCCGTCAGGAAGATTTCTCAGCTTGTGATTGTTAAGCACTATGAGCCCGGAGATTATGTTGTTCGTGAGGGGGAACCTGCAGATGGGCTTTACTTCATATTTGAAGGAGAGGCTGAAGTTATTGGATCGGATAGAACTGATGATGAAAATCATCCAGAATTTCTATTAAAAAGATATGACTATTTTGGTTATGGTCTAGCAAATGCTGTTCATCAAGCTGATGTCATAGCTCTGACTAAGTTGTCATGTTTATTGCTGCTTCATGAGCACTCAGCACTGCTACAGCCAAATTCTATTTGGAGTGAAGAAAAACCTGTTGATACATGCTCGCTAGTGGAGCATATATTGCATTTGGAGCCTATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAAAGGCTCCAAAATTCGGGAAGGTGTTTGGTGGACAGACAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTTGGGGATTTTAACATGCCAATTATATATCAAGTTCATAGACTCCGTGAAGGGAAGAGCTTTGCCACAAGGAGAGTGGATGCAATTCAAAAGGGAAATATCATTTTCACATTGATGGCTTCATTTCAAAAAGAGGAAATTGGGTTTGAACACCAGGAAGTGACTATGCCATCTGTCCCTAATCCAGATGAGGCAAGTACCAAGCTTACACTTCTTTCAATGGAAGAGTTACGGGAACAACGTCTTACTGACCCACGTCTCCCAAGAACTTACCGTAACAAGGTTGCTACATCCGAGTTCATTCCCTGGCCCATAGAGATAAGGTTCTGTGAGCCAAAAACTAAAACAACTCAGACCAAATCTCCTCCCAGCTTGAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCTGATCTGATATTTCTTCAAGTTAGCTTAAACCCTCATCGTCGAAAGGGCTTCAAGGCCCGGGCTGTTAGCCTAGACCACTCGATGTGGTTTCATCGCCCTCTAAGAGCTGATGACTGGGTTCTATTTGTGATCTTTTCTCCTAGTACCTCCAATGCGCGTGGCTATGTCTCAGGCCAAATGTTCAATCAGAAGGGAGAACCATCAAATCTAAGTTGTGAGGTAGCTGAAGATGCAGGCGAACATGTGGTTCCTGTTCAGGGTATCAACGCAAATGTTTAA 1314 0.4368 MAKEEQVFEFLGCVPLLQRLPSSSVRKISQLVIVKHYEPGDYVVREGEPADGLYFIFEGEAEVIGSDRTDDENHPEFLLKRYDYFGYGLANAVHQADVIALTKLSCLLLLHEHSALLQPNSIWSEEKPVDTCSLVEHILHLEPIEVDIFRGITPPKAPKFGKVFGGQTVGQALAAASKSVDCLKVVHSLHAYFLLVGDFNMPIIYQVHRLREGKSFATRRVDAIQKGNIIFTLMASFQKEEIGFEHQEVTMPSVPNPDEASTKLTLLSMEELREQRLTDPRLPRTYRNKVATSEFIPWPIEIRFCEPKTKTTQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRRKGFKARAVSLDHSMWFHRPLRADDWVLFVIFSPSTSNARGYVSGQMFNQKGEPSNLSCEVAEDAGEHVVPVQGINANV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3341 437 SMART cnmp_10 16 135 IPR000595 -
Amo14g3341 437 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Amo14g3341 437 Pfam Thioesterase-like superfamily 154 411 - -
Amo14g3341 437 CDD Thioesterase_II_repeat2 147 239 - -
Amo14g3341 437 CDD CAP_ED 16 100 IPR000595 -
Amo14g3341 437 Pfam Cyclic nucleotide-binding domain 35 109 IPR000595 -
Amo14g3341 437 Gene3D - 130 414 IPR042171 -
Amo14g3341 437 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 411 IPR029069 -
Amo14g3341 437 Gene3D Jelly Rolls 1 123 IPR014710 -
Amo14g3341 437 PANTHER ACYL-COA THIOESTERASE 52 411 - -
Amo14g3341 437 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 241 IPR029069 -
Amo14g3341 437 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 43 59 IPR018488 -
Amo14g3341 437 SUPERFAMILY cAMP-binding domain-like 6 109 IPR018490 -
Amo14g3341 437 PANTHER ACYL-COA THIOESTERASE 52 411 IPR003703 GO:0006637|GO:0047617
Amo14g3341 437 CDD Thioesterase_II_repeat1 320 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3341 Amo-Chr14 135538883 135545131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3341 5 411 Acyl Lipid Metabolism Gene Families AT1G01710 69.287 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3341 K01068 - gmx:100805018 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3341 14 135538883 135545131 Amo14g3341 14 135538883 135545131 ECH
Amo14g3341 14 135538883 135545131 Amo04g2856 04 103697725 103703930 hybridization
Amo14g3341 14 135538883 135545131 Amo02g0162 02 1928667 1932397 PCT
Amo02g0162 02 1928667 1932397 Amo14g3341 14 135538883 135545131 PCT