Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0162 ATGGACAACGAGCAAGTGATTGAGTTTTTGGGATGCGTTCCTCTTGTGCAGAGGCTTCCTCGCTCTTCAGTCAGGAAGATATCTCAACTCGTGGTTGTCAAACACTATGAGGCAGCAGAGTATGTTGCTCGCGAGGGTGAGGCTGGGGATGGTGTCTACTTCATCTGGGAGGGAGAGGCTGAGGTTGTTGGATCTGTGAAGGCCAATGATGAAATTCGTCCACAGTTTCAATTGAAAAGATATGACTACTTTGGTTATGGTTTTTCAAATCCAGTTCACCAGACAGATGTCATTGCTTTGTCAAAGCTCACTTGCTTGGTGCTGCCCCAAGAACACTTGCCACTGCTGCACCCTAATTCTATCTGGAGAGCCGACAACTCTGTCAAAACATCTTCAACTCTGGAGATTATATTGCATTTGGAACCCATTGAGGTAAATATTTTCAAAGGAGTTACACTTCCGGATGCTCCACATTTTGGAAAGGTGTTTGGGGGACAGTTTATTGGGCAGGCACTGGCTGCTGCATCAAAATCAGTTGACTTTTCTAAGCTTGTTCACAGCTTGCATGCCTATTTTATTCTTCCAGGGGACCTACACATGCCAATTGTATATAAAGTTGATCGTCTTCGAGATGGAAAGAGCTTTGCTACACGGAGAGTTGATGCAATTCAAAAGGGAAATATTGTGTTCACTTTGCTGGCTTCATTTCAAAAAGAAGAATTAGGATTTGACCACCAGGAGGTAACTATGCCATCTGTGCCTCCACCAGATAAGCTTTTGTCAATGGAGGAGCTGCGGGAGACACGTCTTACTGACCCTCGTCTTCCAAAAACTTACCGGAACAAAATTGCTACAACTAAATTCACCCCTTGGCCAATAGAGATACGGTTCTGTGAACCTACAACTTCAACAAATCAGACCAAATCTCCTCCCAGTTTGAATTTTTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATTTGCTTCTGATTTAATATTTCTTCAAGTAGCTTTGAATCCCCACCGGAAGCAGGGTATGAAGGCAAGCTCTGTTAGTCTTGATCATGCGATGTGGTTTCACCGACCTGTAATAGCTGATGACTGGATACTATATGTGATTTTTAGTCCTAGTGCATATAATGCACGTGGCACTGTCACAGGCCAGATGTTCAATCAGAAACGAGAGCTTCTTGCATCATTGGTTCAAGAAGGCCTAATCAGAAAGGTTAAAAGCCAAAGTTCTGCAGCTAAATCTAAGTTGTGA 1290 0.4364 MDNEQVIEFLGCVPLVQRLPRSSVRKISQLVVVKHYEAAEYVAREGEAGDGVYFIWEGEAEVVGSVKANDEIRPQFQLKRYDYFGYGFSNPVHQTDVIALSKLTCLVLPQEHLPLLHPNSIWRADNSVKTSSTLEIILHLEPIEVNIFKGVTLPDAPHFGKVFGGQFIGQALAAASKSVDFSKLVHSLHAYFILPGDLHMPIVYKVDRLRDGKSFATRRVDAIQKGNIVFTLLASFQKEELGFDHQEVTMPSVPPPDKLLSMEELRETRLTDPRLPKTYRNKIATTKFTPWPIEIRFCEPTTSTNQTKSPPSLNFWFRAKGKLSDDQALHRCVVAFASDLIFLQVALNPHRKQGMKASSVSLDHAMWFHRPVIADDWILYVIFSPSAYNARGTVTGQMFNQKRELLASLVQEGLIRKVKSQSSAAKSKL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0162 429 SUPERFAMILY cAMP-binding domain-like 5 114 IPR018490 -
Amo02g0162 429 Pfam Thioesterase-like superfamily 160 415 - -
Amo02g0162 429 Gene3D Jelly Rolls 2 126 IPR014710 -
Amo02g0162 429 Pfam Cyclic nucleotide-binding domain 34 113 IPR000595 -
Amo02g0162 429 CDD CAP_ED 17 113 IPR000595 -
Amo02g0162 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 417 IPR029069 -
Amo02g0162 429 PANTHER ACYL-COA THIOESTERASE 52 429 IPR003703 GO:0006637|GO:0047617
Amo02g0162 429 Gene3D - 128 419 IPR042171 -
Amo02g0162 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Amo02g0162 429 CDD Thioesterase_II_repeat1 315 415 - -
Amo02g0162 429 PANTHER ACYL-COA THIOESTERASE 52 429 - -
Amo02g0162 429 CDD Thioesterase_II_repeat2 146 238 - -
Amo02g0162 429 TIGRFAM tesB: acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Amo02g0162 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 240 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0162 Amo-Chr2 1928667 1932397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0162 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 65.035 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0162 K01068 - jre:109003573 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3341 14 135538883 135545131 Amo02g0162 02 1928667 1932397 PCT
Amo04g2856 04 103697725 103703930 Amo02g0162 02 1928667 1932397 PCT
Amo02g0162 02 1928667 1932397 Amo14g3341 14 135538883 135545131 PCT
Amo02g0162 02 1928667 1932397 Amo04g2856 04 103697725 103703930 PCT