Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3322 ATGAAGAGTTTTTGCTCAAAGGCACCCTTAATTTTCCTCATCACTTTTATAATTATCACAAATTGCTTGTTCTCCGAAGCACAAAAATGTCGCCCAAGCGGCCGAATCATAGGGAAGAAACCTCCTCCAGGACAGTGCAACCAAGAAGATGATTCGGATTGTTGCTTGCAAGGCAAGGTATACACAACCTATGAATGTTCGCCACAAGTGACCGGGCAAACAAAGGCCTACCTCACACTTAACAGCTTCCAGAAAGGTGGAGACGGAGGCGGCCCTTCAGAGTGTGACAACAAGTACCACCCGGACGACACTCCGGTAGTAGCCCTGTCAACAGGATGGTTCAACAACAAGAGCAGGTGTCTAAACAACATCAGGATCAGCGCGAATGGGAGGAGCGTGGTGGCGATGGTGGTGGATGAGTGTGACTCAAGAAAGGGGTGTGATGAGGACCATGATTACCAACCTCCTTGTAAGAACAACATTGTTGATGCCTCTAAGGCTGTTTGGGAAGCATTGGGTGTACCACATGATCAATGGGGTGGCATGGACATTACTTGGTCTGATGCTTGA 570 0.4825 MKSFCSKAPLIFLITFIIITNCLFSEAQKCRPSGRIIGKKPPPGQCNQEDDSDCCLQGKVYTTYECSPQVTGQTKAYLTLNSFQKGGDGGGPSECDNKYHPDDTPVVALSTGWFNNKSRCLNNIRISANGRSVVAMVVDECDSRKGCDEDHDYQPPCKNNIVDASKAVWEALGVPHDQWGGMDITWSDA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3322 189 SUPERFAMILY Barwin-like endoglucanases 67 187 IPR036908 -
Amo14g3322 189 Gene3D - 61 188 IPR036908 -
Amo14g3322 189 PANTHER LIPID TRANSFER PROTEIN 5 189 - -
Amo14g3322 189 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 5 189 IPR039271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3322 Amo-Chr14 134958328 134958897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3322 - - cam:101500410 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3322 14 134958328 134958897 Amo14g3322 14 134958328 134958897 ECH
Amo14g3322 14 134958328 134958897 Amo04g2878 04 103938219 103938976 hybridization
Amo14g3322 14 134958328 134958897 Amo02g0177 02 2010503 2011081 PCT
Amo02g0177 02 2010503 2011081 Amo14g3322 14 134958328 134958897 PCT