Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0177 ATGAAGATCTCAAAATCTTGTGTAATCTTGGTTCTTCTCATAATAAGCTTTTTAAGTGCACTAGCCTTAGCTCATAAACATGATTATGATGATCACACATGTAAGCCTAGTGGCAAGTTAAGGGGCAAAAAACCGCCAAAAGGAAAATGCAAGAGAGACAATTTATCTAAGTGTTGCAAACATGGCAAGGTTTATACAACGTACGACTGTTCGCCCAAGATCACGAACCGAACGAAGGCGATCTTAACACTGAACGGATTTGAGAAGGGTAAGGACGGAGGAGCGCCGTCTGAGTGCGACAAGTACCACTCAGACGACGTTCCAATCGTGGCACTGTCGTCGGGGTGGTTCAACAAAAAGAAGAGGTGCGTGAACAAGATTAGCATATTTGGGAATGGAAGAAAGATTAATGCAATGGTGGTTGATGAGTGTGACTCTACAATGGGGTGTGATTCTGAGCATGATTTCCAGCCTCCTTGCCCTAACAATGTTGTTGATGCCTCCAGAGCTGTTTGGAAGGCCTTGGGTGTTCCAAAGAAGGATTGGGGTGGAATGCAAGTTTTTTGGACTAATGCTTGA 579 0.4404 MKISKSCVILVLLIISFLSALALAHKHDYDDHTCKPSGKLRGKKPPKGKCKRDNLSKCCKHGKVYTTYDCSPKITNRTKAILTLNGFEKGKDGGAPSECDKYHSDDVPIVALSSGWFNKKKRCVNKISIFGNGRKINAMVVDECDSTMGCDSEHDFQPPCPNNVVDASRAVWKALGVPKKDWGGMQVFWTNA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0177 192 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 15 191 IPR039271 -
Amo02g0177 192 SUPERFAMILY Barwin-like endoglucanases 81 190 IPR036908 -
Amo02g0177 192 Gene3D - 65 191 IPR036908 -
Amo02g0177 192 PANTHER RIPENING RELATED PROTEIN FAMILY 15 191 - -
Amo02g0177 192 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0177 Amo-Chr2 2010503 2011081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0177 - - adu:107472800 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3322 14 134958328 134958897 Amo02g0177 02 2010503 2011081 PCT
Amo04g2878 04 103938219 103938976 Amo02g0177 02 2010503 2011081 PCT
Amo02g0177 02 2010503 2011081 Amo14g3322 14 134958328 134958897 PCT
Amo02g0177 02 2010503 2011081 Amo04g2878 04 103938219 103938976 PCT