Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2486 ATGGATAGTACTCGCACCCAACACCAGCATCCAAAGAAGAAGAAGAAGCACTGTGCCCCTTTGCTTACTCTTACAACAACTTCCACTAATCCAAACAACCCTTTCTCCATTCTTCTCTTCTATTTCGCCAAGTCCCTCAGAGCCCTGTGCTTCAACAGGATTCACTGCTGCACTCATGCTTTAGTCATAACCAACACTCTCATCTATGCTTCTTCTTCAATGGAGCCTGTGACCTCCAATGAAGCTTCTCAGAAGGGAAACAAAGAGAGCTTTGCTCATTTGATTGAAGACACTGATAATAAGGCTCGTGAGAGCACAAGCACACCTTCTTCTTCTTCTTCTTCAAGCTCAGAGTTCCTTTCATCTTCGACCAATGCCCATGATGTAGAAGAACAAGAAAAGAGTCCAAGTAGCACTGAGGAATCTTCATCTTCTTCGGTACCTTCAATGGGGTGGCCGGTTAAGGAAATTGCTGCATTGAACTTGGAGAATCAAGATGGTAAGAACAAGAAGCACTTGGGGAATGGGGAATTTGAGAAACAAGAATCAGTATCAGAGATTGAGATGATGAAGGAAAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGTGGAAATGGAGTCCCTACAGCATTGGCTATATCAAATGCCATAACTAATCTTTGTGCTACCTTGTTCGGGCAACTTTGGAGGCTAGAACCCTTGCGTCCGGAGAAGAAAGCAATGTGGCGAAGAGAGATGGAATGGCTTCTATCTGTTAGTGATCACATAGTTGAGCTGATTCCTACTTGGCAAACCTTTGCAGATGGAAACAAACTTGAGGTCATGACTTGTCGACCGCGCTCAGATCTTTATGTCAATCTTCCTGCCCTGCGTAAATTAGATAACATGCTTCTTGAAATTCTTGACAGTTTTGTCAACACAGAGTTTTGGTATGTAGACCAAGGCGTTCTATCCCCAGATGCAGACGGTGTATCTTCTTTTCGACAAGCCCTTCAGCGACAGGAGGAGAAATGGTGGCTTCCCGTGCCAAGAGTCCCTCCTTGTGGCCTTAATGATAATTCAAGGAAGCAGCTGCAGCACAAGCGTGATTGCTCGAACCAAATACTGAAAGCTGCAATGGCCATTAATAGCATTACTTTAGCCGAAATGGACATCCCTGAGTCTTATTTGGAATCTCTTCCAAAGAATGCTAGAGTCAGCTTGGGCGATGTGATTTATCGTTACATCACCTCAGATCATTTTTCTCCCGAGTGTTTGCTGGCATGCCTTGATTTAACTTCTGAGCATCAAGCCATAGAGATCGCGAACCGAGCGGAGGCTTCCATGTACATTTGGCGAAAAAGGATCAACACAAAGCCTGCCAATAACATCACTACCAGTGGCAGAACTAGTTCAAGAACATCATGGGAAATGGTCAAGGATCTGATGGTTGATGGAGACAAAAGGGAATTGTTCTCAGAGAGAGCAGAAAGCCTTCTGCTTTCTCTAAAGCAACGTTTCCCAGGCCTCCCTCAAACGGCCTTAGATATGAGCAAAATCCAATACAACAAGGATGTTGGCAAAGCCATTCTGGAGAGCTACTCTAGAGTGCTGGAGAGCTTGGCATTTAACATGGTAGCACGCATCGACGACGTGCTCTACGTAGATGACTTGACAAAACACTCTGGACAGTTCACATCTCACACAAAAGTTGGTGTAATTACTCACAAGAATATTTCAGTGCCATGCTCAATGCCTGTCCCAGGCACCCCATACAAATCAGCCTTCGGCTCGCCAAGCCTCTCTCCAGCGCAAGGGATCAGTTCTTTAAGGGGAGGGAAATCGCCACTCCTTCCCAGCAGCAGCAGCAGCAATACCAACAGTCCTCATAGAAGAGTAGGGGTGAAGAAATCTTTGACTGATTTTCTTAGCATTGACACAAAAGGAAAAGGGTATGAGAGTTCAAATGAGAAAGTAGCAAGCGATGAAGTGGCAGCATTTGAAACAGATGTGGAGTCAAGTGATTTCACTGAAGAAGCAGTTAGCCCAAATATGCTGCAGAAGGCATGGTTAGAGTGA 2067 0.4485 MDSTRTQHQHPKKKKKHCAPLLTLTTTSTNPNNPFSILLFYFAKSLRALCFNRIHCCTHALVITNTLIYASSSMEPVTSNEASQKGNKESFAHLIEDTDNKARESTSTPSSSSSSSSEFLSSSTNAHDVEEQEKSPSSTEESSSSSVPSMGWPVKEIAALNLENQDGKNKKHLGNGEFEKQESVSEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRPEKKAMWRREMEWLLSVSDHIVELIPTWQTFADGNKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFVNTEFWYVDQGVLSPDADGVSSFRQALQRQEEKWWLPVPRVPPCGLNDNSRKQLQHKRDCSNQILKAAMAINSITLAEMDIPESYLESLPKNARVSLGDVIYRYITSDHFSPECLLACLDLTSEHQAIEIANRAEASMYIWRKRINTKPANNITTSGRTSSRTSWEMVKDLMVDGDKRELFSERAESLLLSLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLAFNMVARIDDVLYVDDLTKHSGQFTSHTKVGVITHKNISVPCSMPVPGTPYKSAFGSPSLSPAQGISSLRGGKSPLLPSSSSSNTNSPHRRVGVKKSLTDFLSIDTKGKGYESSNEKVASDEVAAFETDVESSDFTEEAVSPNMLQKAWLE* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2486 688 MobiDBLite consensus disorder prediction 99 150 - -
Amo14g2486 688 ProSiteProfiles PRONE domain profile. 177 562 IPR005512 GO:0005085
Amo14g2486 688 MobiDBLite consensus disorder prediction 104 126 - -
Amo14g2486 688 MobiDBLite consensus disorder prediction 599 630 - -
Amo14g2486 688 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 185 556 IPR005512 GO:0005085
Amo14g2486 688 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 7 134 651 - -
Amo14g2486 688 MobiDBLite consensus disorder prediction 1 20 - -
Amo14g2486 688 Gene3D PRONE domain, subdomain 1 178 418 - -
Amo14g2486 688 Gene3D PRONE domain, subdomain 1 419 561 - -
Amo14g2486 688 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 134 651 IPR038937 GO:0005085
Amo14g2486 688 MobiDBLite consensus disorder prediction 599 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2486 Amo-Chr14 102645275 102648390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2486 - - gmx:100800673 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2486 14 102645275 102648390 Amo14g2486 14 102645275 102648390 ECH
Amo14g2486 14 102645275 102648390 Amo04g1375 04 65662192 65665552 hybridization
Amo14g2486 14 102645275 102648390 Amo12g2104 12 98539687 98543663 PCT