Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2104 ATGAAGGGAAGGCCTACTATGTACTACAATGGCATGCTGATAAACAACAACGCGGTCTTCGATTCCGATCCGGGTTTTCTTGAAGAAGGGAAAGCTACAATGGAGATCAATAATAGTGAAGTTGTTGAAGGGAATGAAGAAGCTAAGAAGGATGGAGTTACTGAAGTGAATGAAGAATGTGATGAGAATGGCTGCAAAAATGAGACTACTTTTGCTGCTGAATCCAGTTCTGGCTCTGAATTTGTGTCATCTGAGAAAGAACATAATGGTCAAAGTAGTGCTGAGGAGCATTCATGTTCACCACCTTCAATGGGGTCTCCGGATCAAGAAATGGATGACTCAAATTACACACAAAGTCCAAATGGAAGTAGTGAAGATGAAGAGAAAAAGGATTTTGTGATGGAAGTTGAGATGATGAAGGAGAGGTTTGCAAAATTATTACTGGGAGAAGACATGTCAGGTTGTGGAAATGGTGTCCCTACAGCCTTGGCTATATCCAATGCCATAACTAATCTTTGTGCCACCCTGTTTGGACAACTCTGGAGATTGGAACCCCTGACTTCGGAGAAGAAAGCAATGTGGAGAAGAGAGATAGAGTGGCTACTTTCCGTCGCCGATCATGTCGTAGAATTGAAACCTACATGGCAAACTTTTCCAGATGGAACCAAGCTTGAGGTCATGACTTGCAGACCACGTTCAGATCTTTATGTCAATCTTCCTGCTCTGCGAAAATTAGATAACATGCTTCTTGAAATACTAGATGGTTTCATCAATGCTGAGTTCAGGTATGTAGAGCAAGGTGTTCTTGCACCGGATACGGATGACGGTTCGTCTTCTTTTCGAAAAGTGGTGCAGCGACAAGAGGAGAAATGGTGGCTTCCTGTACCTCAAGTTCCACCCTATGGCTTACACGAGAATTCAAGAAAGCAGTTGCAGCACAAGCGCGATTGCGCAAGCCAAATACTCAAAGCTGCAATGGCTATTAACAGCACCACTCTTGCTGAAATGGAGGTTCCTCATGCATATTTGGACTCTCTTCCAAAGACAGCAAGAGGCAGCTTGGGAGATGTAATTTATAGGTACATTACATCAGAGAATTTTTCTCCAGAGTGTTTGTTAGAGTGCCTTGATGTATGTTCTGAGCATCAAGCAATAGAGGTTGCCAACAGAGTTGAGGCTTCAGTTTATATCTGGCACAAGAAGACCAACTCGAAGCTTCCGAATCGCGCCACCAGATACAGTTCAAGATCTTCATGGGAGATGTTCAAGGATCTAATCCTTGAAGGTGACAAGAGAGAACTGCTTATAGAGAGAGCAGAAACGCTTCTGCTCTCCTTGAAGCAGCGTTTTCCTGCTCTCCCTCAAACTGCATTAGATACATGCAAAATCCAATGCAACAAGGATGTTGGGAAATCAATTCTAGAGAGCTACTCTAGAGTACTAGAGAGTTTGGCTTCAAATATTGTTGCAAGAATTGATGATGTGCTCTATGTGGATGACTTGACCAAACATTCTTCAGATCAATTCTCAATGCTCCCAAAACTTGGTTTGATCACTCACAACAATCATATTTCTTCAGTTCCATATGTCCCAACAACTTCATCATATAATAATAAATCAGGTCTTGAAACACCAAAAGCAGGGGTTATTTGCCCTGCAAAGGGAGGAAAATCATCGATGACCAATAATACTAATAGTAACATTAATAGAATAATTTTGACAGATTTTCTTAGCATTGATAGAAAAGGGAAGGACTATGGATGTGAAATTGAGAACTTAGTTCCAACATTAACAGAATTTGATGATGAGGTTCCACCTTGTGAAACAGAGGCAAGTGATTGCACAGATGATGATGTCAAGCATAAAGCATTGGAACAGGCTTGGATAGAGTGA 1893 0.4157 MKGRPTMYYNGMLINNNAVFDSDPGFLEEGKATMEINNSEVVEGNEEAKKDGVTEVNEECDENGCKNETTFAAESSSGSEFVSSEKEHNGQSSAEEHSCSPPSMGSPDQEMDDSNYTQSPNGSSEDEEKKDFVMEVEMMKERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLTSEKKAMWRREIEWLLSVADHVVELKPTWQTFPDGTKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDGFINAEFRYVEQGVLAPDTDDGSSSFRKVVQRQEEKWWLPVPQVPPYGLHENSRKQLQHKRDCASQILKAAMAINSTTLAEMEVPHAYLDSLPKTARGSLGDVIYRYITSENFSPECLLECLDVCSEHQAIEVANRVEASVYIWHKKTNSKLPNRATRYSSRSSWEMFKDLILEGDKRELLIERAETLLLSLKQRFPALPQTALDTCKIQCNKDVGKSILESYSRVLESLASNIVARIDDVLYVDDLTKHSSDQFSMLPKLGLITHNNHISSVPYVPTTSSYNNKSGLETPKAGVICPAKGGKSSMTNNTNSNINRIILTDFLSIDRKGKDYGCEIENLVPTLTEFDDEVPPCETEASDCTDDDVKHKALEQAWIE* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2104 630 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 50 630 IPR038937 GO:0005085
Amo12g2104 630 Gene3D PRONE domain, subdomain 1 368 508 - -
Amo12g2104 630 Gene3D PRONE domain, subdomain 1 126 367 - -
Amo12g2104 630 ProSiteProfiles PRONE domain profile. 126 509 IPR005512 GO:0005085
Amo12g2104 630 MobiDBLite consensus disorder prediction 68 122 - -
Amo12g2104 630 MobiDBLite consensus disorder prediction 39 129 - -
Amo12g2104 630 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 50 630 - -
Amo12g2104 630 MobiDBLite consensus disorder prediction 42 65 - -
Amo12g2104 630 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 135 503 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2104 Amo-Chr12 98539687 98543663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2104 - - aip:107625628 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2104 12 98539687 98543663 Amo12g2104 12 98539687 98543663 ECH
Amo14g2486 14 102645275 102648390 Amo12g2104 12 98539687 98543663 PCT
Amo04g1375 04 65662192 65665552 Amo12g2104 12 98539687 98543663 PCT