Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1513 ATGGCAATGGAGGAGGAAGAGCCGAGCCAGCTGAAGAGAGCGTTGATTGATTCCTCTGCTGGAGCTATTTCTGGTGCTATATCAAGAACAGTTACCTCTCCCCTTGATGTTATTAAGATTAGGTTCCAGGTTCAACTCGAGCCCACATCTTCATGGGCTTTACTACGCAAGGAAATTTCTGCACCATCAAAATATACTGGCATGCTTCAAGCAAGCAAAGATATCTTTAGAGAAGAAGGCATACGGGGTTTTTGGCGGGGCAATGTACCAGCTTTGCTCATGGTTATGCCATATACATCCATACAGTTCACAGTTTTGCACAAGTTAAAATCTTTTGCCTCTGGTTCTTCCAAATCAGAGAATCACATTAATTTGAGCCCTTATCTATCCTATGTGAGTGGGGCATTAGCTGGGTGTACAGCTACTGTAGGATCATATCCTTTTGATCTCCTTCGAACCATATTAGCTTCTCAAGGTGAACCGAAGGTTTATCCAAACATGAGGTCAGCATTCGTTGACATTGTTAAGACTCGTGGTTTCTCTGGCTTGTATGCCGGACTGTCACCAACGCTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGTACTTACGATACGTTTAAACGTTGGGCTATGGCATGGAACCACACTCAATACTCAAATGCTATTGGAGAAGATAGCCTATCTAGCTTTCAACTTTTCCTGTGTGGGTTGGCTGCTGGTACATGCGCTAAGCTTGTTTGTCATCCACTTGATGTAGTCAAGAAAAGATTTCAGATTGAAGGTCTGCAAAGGCATCCAAGATATGGAGCTCGTGTGGAACACCGTGCGTACAGAAACATGTTTGACGCCATGAAACGGATATCACAGGCAGAAGGTTGGGCTGGTCTGTATAAGGGGATCATCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTAGCATATGAATTGACATCAGATTGGCTCGAGTCAATTTTGACTTGA 999 0.4374 MAMEEEEPSQLKRALIDSSAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWALLRKEISAPSKYTGMLQASKDIFREEGIRGFWRGNVPALLMVMPYTSIQFTVLHKLKSFASGSSKSENHINLSPYLSYVSGALAGCTATVGSYPFDLLRTILASQGEPKVYPNMRSAFVDIVKTRGFSGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHTQYSNAIGEDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDAMKRISQAEGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESILT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1513 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 211 IPR018108 -
Amo14g1513 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 112 IPR018108 -
Amo14g1513 332 Pfam Mitochondrial carrier protein 229 327 IPR018108 -
Amo14g1513 332 Pfam Mitochondrial carrier protein 18 113 IPR018108 -
Amo14g1513 332 Pfam Mitochondrial carrier protein 126 212 IPR018108 -
Amo14g1513 332 PRINTS Mitochondrial carrier protein signature 17 30 IPR002067 GO:0055085
Amo14g1513 332 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085
Amo14g1513 332 PRINTS Mitochondrial carrier protein signature 87 107 IPR002067 GO:0055085
Amo14g1513 332 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Amo14g1513 332 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Amo14g1513 332 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
Amo14g1513 332 PANTHER SOLUTE CARRIER FAMILY 25 7 331 - -
Amo14g1513 332 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 331 - -
Amo14g1513 332 Gene3D Mitochondrial carrier domain 9 329 IPR023395 -
Amo14g1513 332 SUPERFAMILY Mitochondrial carrier 13 321 IPR023395 -
Amo14g1513 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 326 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1513 Amo-Chr14 26223134 26227654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1513 4 332 Organic Solute Cotransporters AT3G21390 75.375 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1513 K15108 - gmx:100803750 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1513 14 26223134 26227654 Amo14g1513 14 26223134 26227654 ECH
Amo14g1513 14 26223134 26227654 Amo04g0387 04 7590311 7595235 hybridization
Amo01g3482 01 107492910 107495964 Amo14g1513 14 26223134 26227654 PCT
Amo11g2653 11 134690636 134693848 Amo14g1513 14 26223134 26227654 PCT
Amo14g1513 14 26223134 26227654 Amo01g3482 01 107492910 107495964 PCT
Amo14g1513 14 26223134 26227654 Amo11g2653 11 134690636 134693848 PCT