Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1352 ATGGGCGCGCCGGAGAAATCGCAGGCGAATTCCTCTAATTCGATGCAGCGTGTCAAGGTTTATCGAATGAATGATGATGGAAAATGGGATGACCAAGGCACTGGACATGTCACTATTGATTATATAGAGAGATCAGAAGAGCTGGGTTTATTTGTTTATGATGAAGAAGATAATGACAACTTACTAATGCATCGCATCAGTTCTGAAGATATTTACAGGAAACAAGAAGATACAATCATCTCWTGGAGAGATCCAGAATCTGGTACAGAACTAGCCCTTAGCTTTCAAGAGACTAGTGGATGCTCTTATATTTGGGACAATATTTGCAATGTGCAAAGGAATATGCATTTTACTTTAAATAGTGAGGCATTTCACAGTGTAAACAGTGAGTTAAGGGAGTTACCCGCGGTTGAGTTGTCAACACTTCCTTTGATTCTTAAGACTCTGGTTGAGAGTGGCATTGCAGACCAGTTGCGGCTTGCGGAGCTAATATTGAGTGATCAAGATTTTTTTCGAAAGCTGATGGAACTATTCAGAAGATGTGAAGACTTGGAAAATATTGATGGCCTTCACATGATTTTCAAGATAGTCAAAGGGATAATATTGCTTAATAGTACACAAATTTTCGAGAGAATATTCAGTGATGAATTTATAATGGACATTATTGGTTCTCTTGAGTATGATCCAGAAGCTCCTCATATTCAGCATCATCGTAAATTCTTAAAGGAGCATGTTATTTTTAAGGAGGCTGTACCAATAAAGGATCGTACTGTGTTGTCAAAGATACATCAGACATATAGAGTTGGTCTTTTGAAGGATGTTGTTTTGGCTAGAGTATTGGATGAGGCTACTGTTGCAAATCTCAACTCTATGATATATGCAAACAATGCCTTTGTTGTTTCTGTATTGAAGGATGACAGTACATTTATCCAGGAGTTATTTGCTAGGTTAAAATCCCCCACCACTACTTCTGAATCAAAGAAAAATTTGGTTTATTTCTTGTATGAGTTTTGTAGTTTAAGCAAGAGCCTACCAATGGTTCAGCAGCTTCGGCTTTTTAGGGATCTGATGAATGAAGGCATCTTTGACATTATCACCGATGTCCTGCAATGTCAAGACAAGAAGTTTGTGCTTACTGGAACAGATATCCTCATTCTATTCTTGAATCAGGATCCTAATCTTCTGCGTTCCTATGTTGTGAGGCAAGAAGGAATGACACTACTTGGACTGTTGGTTAGAGGAATGATAACAGATTTTGGAGATGAGATGCACTGCCAGTTTCTTGAAATCATTCGGAGTTTGTTGGACTCGTGCACGTTGTCTGGAGCACAGAGGGACACTATAATTGACATATTCTTTGAGAAGCATTTGGGTCAACTGATTGAAGTGATAACAGCATCATGTCCTCCAGAAAATGTTTCCCGTGCAAGTAGCAAATCTGTAGGTCCTGCTCAAAGAGTTAAGTTGCAGAGTGTGACGAAGCCAGAGATACTAGCAAACATATGTGACTTATTATGCTTTTGTGTCTTGCACCATCCATACAGGATAAAGTGCAACTTTCTTCCTAATAATGTGATTGATAAAATTTTGTTACTGACACGGAGAAGAGAAAAATACTTGGTTGTTGGTGCTGTCCGGTTTGTTCGTACTATTCTCTCCCGCCATGATGAGCATCTGATTATCCATTTTGTTAGAAATAATCTTCTCAAACCAATTGTAGATGCCTTTGTTGCCAATGGAAATCGCTACAATCTGCTTAACTCTGCGGTTCTTGAACTTTTTGAGTATATTCGCAAGGAGAATCTAACATTGTTGCTGAAATATATAATTGAATCCTTCTGGGACCAGTTGATGAAATTTGAGTATTTGGTATCCATTCGCTCGCTGAAAGTAAAGTATGAGCAGTGTGTAGATAATGGTGGTACAAAAAGTACATCTAATGTGACTGACCTTCGAAGACGAACTGATGAGCGTTGTTTGGAGAAAGAAGAGGAAGAGTACTTTAATGAAGACAGTGATGAAGAGGATACATCTGCATCCATTTCGCGAAATCAGAAAGGGCAGCAGCAAAAACCTGTTTTGTCCAATGGAGTTGCTGCAGGCTACTCGCAGAGTCCAAGGTCTGGTGCACTGGTTGATTATGATGATGACGAGGATGATGAGGATTACAGGCCGCCACAAAGGAAGCAACTGGAGACTTCTGAAGAGGATGAAGGGACAATGGAGTCTCTCAGGCTGAAAAGGAAATTGCCTTCAAAGGATAAGGAKCCTGAGTCAGTGAAGAAGCAGAAACTGTCTAAGAACTCAAAATCAAAAGAKAGTGTTTTTGCTGCGTTGTGTTCAACATTGAGCCAGGCTGTGCTACCTGTTAAGAGAACTGCAATGAACATTCATACAGGCCCTTGGCCAAATGATGGGAGGGAGAGCCCAGGGGAAGGCAATCAAGAAAAGGGGTCAAGTGTTTCTGGAACCTGTTCTGAGATTAGCAATACAACAAATGAAGAGAACCATTTAGATAGAGAAACTGCTGCCTCAAGAAATGTTTCTGAAAGGTTACCTGGCACCCTGGAGAATGGCCAGTTGGGTACTGAGGAACATCCATTGGTTTCACCAAAATCCTCACCAGAGATGGCTGTCAACGGATCTTAG 2649 0.4032 MGAPEKSQANSSNSMQRVKVYRMNDDGKWDDQGTGHVTIDYIERSEELGLFVYDEEDNDNLLMHRISSEDIYRKQEDTIISWRDPESGTELALSFQETSGCSYIWDNICNVQRNMHFTLNSEAFHSVNSELRELPAVELSTLPLILKTLVESGIADQLRLAELILSDQDFFRKLMELFRRCEDLENIDGLHMIFKIVKGIILLNSTQIFERIFSDEFIMDIIGSLEYDPEAPHIQHHRKFLKEHVIFKEAVPIKDRTVLSKIHQTYRVGLLKDVVLARVLDEATVANLNSMIYANNAFVVSVLKDDSTFIQELFARLKSPTTTSESKKNLVYFLYEFCSLSKSLPMVQQLRLFRDLMNEGIFDIITDVLQCQDKKFVLTGTDILILFLNQDPNLLRSYVVRQEGMTLLGLLVRGMITDFGDEMHCQFLEIIRSLLDSCTLSGAQRDTIIDIFFEKHLGQLIEVITASCPPENVSRASSKSVGPAQRVKLQSVTKPEILANICDLLCFCVLHHPYRIKCNFLPNNVIDKILLLTRRREKYLVVGAVRFVRTILSRHDEHLIIHFVRNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLTLLLKYIIESFWDQLMKFEYLVSIRSLKVKYEQCVDNGGTKSTSNVTDLRRRTDERCLEKEEEEYFNEDSDEEDTSASISRNQKGQQQKPVLSNGVAAGYSQSPRSGALVDYDDDEDDEDYRPPQRKQLETSEEDEGTMESLRLKRKLPSKDKXPESVKKQKLSKNSKSKXSVFAALCSTLSQAVLPVKRTAMNIHTGPWPNDGRESPGEGNQEKGSSVSGTCSEISNTTNEENHLDRETAASRNVSERLPGTLENGQLGTEEHPLVSPKSSPEMAVNGS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1352 882 MobiDBLite consensus disorder prediction 681 703 - -
Amo14g1352 882 SUPERFAMILY ARM repeat 285 599 IPR016024 -
Amo14g1352 882 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Amo14g1352 882 Gene3D - 11 129 IPR011993 -
Amo14g1352 882 PANTHER BNAC03G34820D PROTEIN 106 882 - -
Amo14g1352 882 MobiDBLite consensus disorder prediction 796 882 - -
Amo14g1352 882 MobiDBLite consensus disorder prediction 813 832 - -
Amo14g1352 882 SUPERFAMILY PH domain-like 16 112 - -
Amo14g1352 882 PANTHER BNAC03G34820D PROTEIN 1 107 - -
Amo14g1352 882 MobiDBLite consensus disorder prediction 722 765 - -
Amo14g1352 882 MobiDBLite consensus disorder prediction 662 768 - -
Amo14g1352 882 PANTHER ATP SYNTHASE GAMMA-RELATED 1 107 - -
Amo14g1352 882 PANTHER ATP SYNTHASE GAMMA-RELATED 106 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1352 Amo-Chr14 22260493 22275253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1352 K17491 - gmx:100786790 1338.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1352 14 22260493 22275253 Amo14g1352 14 22260493 22275253 ECH
Amo14g1352 14 22260493 22275253 Amo04g0014 04 168897 183585 hybridization
Amo01g3311 01 105428307 105441033 Amo14g1352 14 22260493 22275253 PCT
Amo14g1352 14 22260493 22275253 Amo01g3311 01 105428307 105441033 PCT