Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0014 ATGGGCGCGCTGGAGAAATCGCAGGCGAATTCCTCTAATTCGATGCAGCGTGTCAAGGTTTATCGAATGAATGATGATGGAAAATGGGATGACCAAGGCACTGGACATGTCACTATTGATTATATAGAGAGATCAGAAGAGCTGGGTTTATTTGTTTATGATGAAGAAGATAATGACAACTTACTAATGCATCGCATCAGTTCTGAAGATATTTACAGGAAACAAGAAGATACAATCATCTCWTGGAGAGATCCAGAATCTGGTACAGAACTAGCCCTTAGCTTTCAAGAGACTAGTGGATGCTCTTATATTTGGGACAATATTTGCAATGTGCAAAGGAATATGCATTTTACTTTAAATACTGAGGCATTTCACAGTGTAAACAGTGAGTTAAGGGAGTTACCCGCGGTTGAGTTGTCAACACTTCCTTTGATTCTTAAGACTCTGGTTGAGAGTGGCATTGCAGACCAGTTGCGGCTTGCGGAGCTAATATTGAGTGATCAAGATTTTTTTCGAAAGCTGATGGAACTATTCAGAAGATGTGAAGACTTGGAAAATATTGATGGCCTTCACATGATTTTCAAGATAGTCAAAGGGATAATATTGCTTAACAGTACACAAATTTTCGAGAGAATATTCAGTGATGAATTTATAATGGACATTATTGGTTCTCTTGAGTATGATCCAGAAGCTCCTCATATTCAGCATCATCGTAAATTCTTAAAGGAGCATGTTATTTTTAAGGAGGCCGTACCAATAAAGGATCGTACTGTGTTGTCAAAGATACATCAGACATATAGAGTTGGTCTTTTGAAGGATGTTGTTTTGGCTAGAGTATTGGATGAGGCTACTGTTGCAAATCTGAACTCTATGATATATGCAAACAATGCCTTTGTTGTTTCTGTATTGAAGGATGACAGTACATTTATCCAGGAGTTATTTGCTAGGTTAAAATCCCCCACCACTTCTTCTGAATCAAAGAAAAATTTGGTTTATTTCTTGTATGAGTTTTGCAGTTTAAGCAAGAGCCTACCAATGGTTCAGCAGCTTCGACTTTTTAGGGATCTGATGAATGAAGGCATCTTTGATATTATCACTGATGTCCTGCAATGTCAAGACAAGAAGTTTGTGCTTACTGGAACAGATATCCTCATTCTATTCTTGAATCAGGATCCTAATCTTCTGCGTTCCTATGTTGTGAGGCAAGAAGGAATGACACTACTTGGACTGTTGGTTAGAGGAATGATAACAGATTTTGGAGATGAGATGCACTGCCAGTTTCTTGAAATCATTCGGAGTTTGTTGGACTCGTGCACGTTGTCTGGAGCACAGAGGGACACTATAATTGACATATTCTTTGAGAAGCATTTGGGTCAACTGATTGAAGTGATAACAGCATCATGTCCTCCAGAAAATGTTGCCCGTGCAAGTAGCAAATCTGTAGGTCCTGCTCAAAGAGTTCAGTTGCAGAGTGTGACGAAGCCAGAGATACTAGCAAACATATGTGACTTATTATGCTTTTGCGTCTTGCACCATCCATACAGGATAAAGTGCAACTTTCTTCCTAATAATGTGATTGATAAAATTTTGTTACTGACACGGAGAAGAGAAAAATACTTGGTTGTTGGTGCTGTCCGGTTTGTTCGTACTATTCTCTCCCGCCATGATGAGCATCTGATTATCCATTTTGTTAGAAATAATCTTCTCAAACCAATTGTAGATGCCTTTGTTGCCAATGGAAATCGCTACAATCTGCTTAACTCTGCAGTTCTTGAACTTTTTGAGTATATTCGCAAGGAGAATCTAACATTGTTGCTGAAATATATAATTGAATCCTTCTGGGACCYGTTGATGAAATTTGAGTATTTGGTATCCATTCGCTCGCTGAAAGTAAAGTATGAGCAGTGTGTAGATAATGGTGGTACAAAAAGTACATCTAATGTGACTGACCTTCGAAGACGAACTGATGAGCGTTGTTTGGAGAAAGAAGAGGAAGAGTACTTTAATGAAGACAGTGATGAAGAGGATTCATCTGCATCCATTTCGCGAAATCAGAAAGCGCAGCAGCAAAAACCTGTTTTGTCCAATGGAGTTGCTGCAGGCTACTCACAGAGTCCAAGGTCTGGTGCACTGGTCGATTATGATGATGACGAGGATGATGAGGATTACAGGCCGCCACAAAGGAAGCAACTGGAGACTTCTGAAGAGGATGAAGGGACAATGGAGTCTCTCAGGCTGAAAAGGAAATTGCCTTCAAAGGATAAGGAMCCTGAGTCAGTGAAGAAGCAGAAACTGTCTAAGAACTCAAAATCAAAAGAMAGTGTTTTTGCTGCGTTGTGTTCAACATTGAGCCAGGCTGTGCTACCTGTTAAGAGAACTGCAATGAACATTCATACAGGCCCTTGGCCAAATGATGGGAGGGAGAGCCCAGGGGAAGGCAATCAAGAAAAGGGGCCAAGTGTTTCTGGAACCTGTTCTGAGATTAGCAATACAACAAATGAAGAGAACCATTTAGATAGAGAAACTGCTGCCTCAAGAAATGTTTCTGAAAGGTTACCTGGCACCCTGGAGAATGGCCAGTTGGGTACTGAGGAACATCCATTGGTTTCACCAAAATCCTCACCAGAGATGGCTGTCAACGGATCTTAG 2649 0.4039 MGALEKSQANSSNSMQRVKVYRMNDDGKWDDQGTGHVTIDYIERSEELGLFVYDEEDNDNLLMHRISSEDIYRKQEDTIISWRDPESGTELALSFQETSGCSYIWDNICNVQRNMHFTLNTEAFHSVNSELRELPAVELSTLPLILKTLVESGIADQLRLAELILSDQDFFRKLMELFRRCEDLENIDGLHMIFKIVKGIILLNSTQIFERIFSDEFIMDIIGSLEYDPEAPHIQHHRKFLKEHVIFKEAVPIKDRTVLSKIHQTYRVGLLKDVVLARVLDEATVANLNSMIYANNAFVVSVLKDDSTFIQELFARLKSPTTSSESKKNLVYFLYEFCSLSKSLPMVQQLRLFRDLMNEGIFDIITDVLQCQDKKFVLTGTDILILFLNQDPNLLRSYVVRQEGMTLLGLLVRGMITDFGDEMHCQFLEIIRSLLDSCTLSGAQRDTIIDIFFEKHLGQLIEVITASCPPENVARASSKSVGPAQRVQLQSVTKPEILANICDLLCFCVLHHPYRIKCNFLPNNVIDKILLLTRRREKYLVVGAVRFVRTILSRHDEHLIIHFVRNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLTLLLKYIIESFWDXLMKFEYLVSIRSLKVKYEQCVDNGGTKSTSNVTDLRRRTDERCLEKEEEEYFNEDSDEEDSSASISRNQKAQQQKPVLSNGVAAGYSQSPRSGALVDYDDDEDDEDYRPPQRKQLETSEEDEGTMESLRLKRKLPSKDKXPESVKKQKLSKNSKSKXSVFAALCSTLSQAVLPVKRTAMNIHTGPWPNDGRESPGEGNQEKGPSVSGTCSEISNTTNEENHLDRETAASRNVSERLPGTLENGQLGTEEHPLVSPKSSPEMAVNGS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0014 882 MobiDBLite consensus disorder prediction 681 703 - -
Amo04g0014 882 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Amo04g0014 882 Gene3D - 11 130 IPR011993 -
Amo04g0014 882 SUPERFAMILY ARM repeat 285 599 IPR016024 -
Amo04g0014 882 PANTHER ATP SYNTHASE GAMMA-RELATED 1 107 - -
Amo04g0014 882 PANTHER ATP SYNTHASE GAMMA-RELATED 106 882 - -
Amo04g0014 882 PANTHER BNAC03G34820D PROTEIN 1 107 - -
Amo04g0014 882 PANTHER BNAC03G34820D PROTEIN 106 882 - -
Amo04g0014 882 MobiDBLite consensus disorder prediction 722 765 - -
Amo04g0014 882 MobiDBLite consensus disorder prediction 662 768 - -
Amo04g0014 882 MobiDBLite consensus disorder prediction 815 832 - -
Amo04g0014 882 SUPERFAMILY PH domain-like 16 112 - -
Amo04g0014 882 MobiDBLite consensus disorder prediction 791 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0014 Amo-Chr4 168897 183585 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0014 K17491 - gmx:100802657 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1352 14 22260493 22275253 Amo04g0014 04 168897 183585 hybridization
Amo01g3311 01 105428307 105441033 Amo04g0014 04 168897 183585 PCT
Amo04g0014 04 168897 183585 Amo01g3311 01 105428307 105441033 PCT