Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3753 ATGGTGAGGCTACTCGGGTTCATTCGTGGTTTTGATGAGCCCAGGGAAATCACGTCGAGGTCGAACATCACCGGTGAGTCAAGTGAAAACGGCTGGCTCATCAGGTTCTTTGACTCGGATTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCACGCCGGGGTGCGTGATTATCTCTGTAATAGAATGTATACTCTTCCCTTGCAGGGGATTGAGAGTTATTTGTTCCAAGTATGTTACATGATGATACACAAGCCCAGCCCCTCCTTGGATAAGTTTGTCATAGATGTGTGCGCCAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTGTTGGCCGAGCTTGAGGATTCTGATGACAATGAAGGGATTAGTAGGGTTATGGAGAAGTGCCAGATTGCAGCCACCTTGATGGGCGAGTGGCCTCCCTTGATTCGCCCTCAAACCGAGACTCCGAGTTCTGGAGGCAAGTTGAATAGGTTACTGTCTTCGAAATCTCGCTTTTTGTCTCTGACATCCTCCCCGCCGTCACAGAAGTCTTTATCGTTCTCACCTCCTTCGGGGAACATTGTGCAAGAGGATGGCAATCCTTTATCTCCTGATGAGAACAAGATATTTAAGAAGCTTATTCCAAGTCCAAAGTTTAGAGATGCTTTGCGTTTTAGGAAGTCAGTGGATAAAGACAATAATGATTCTGAAAAGGATGGGTTTTTCAAGAGACTTCTAAAAGATAGCAAAGGTGAGGACGAGCTAGGCCAGAAAATACGAGATGCATTTTCCTTTCGGAAGTCATCTGAAAAAGATGACGAAGACTCTGAAAAGGATAATTTTTTTAAAAGGTTATTAAGCAGTAGGGATAGTAAGGGTGACGAAGAAGACTCTGAAAAGGATGGTTTCCTTCGAAGACTATTGAGGGATAGAGGCGAGGATGAGGATTTGACCTCAAGTTCTGAGGGATTTTTTAAGAGATTGTTTCGTGATAGCAAGAATGATTCTGAGGATGGAAGTCACACTAAAACAATTGAAGATGCAGAGAAAGAGGGGCTTTTCCGAAAGTTTTTCCGGGAGAAATCTGAAGATAGAAAGGAGGGGAGTGATAGAAATGACGGAGTTGCTAATTCTGAAGAGAAATGTGTCAAACCTGTGGAAGAAGATGAAAAAGAAGGGTTTATCAGGAAGTTTTTCAAGGATAAATTTGAGGACAAGAAAGATACAAACGATAAAACTGAAGAGGGCACTGCCAATGGTGAGGAAGAAGAGCTTTTCGAGTTTTCCTTGTTCAAAAGACTGTTTCGGGTGCACCCAGAAGATGCTAAACGTAGTCCCGCCAATGAAAATGGCAATAAAGGTGGCTTGTTTGAGAGTAGTCCAGGTACAGAGAATTTTTTTCGCAAATTATTTAAAGATCGTGACAGATCAATAGAAGATTCAGAGTTATTGGGATCAAAGAAGCAGAAAGAGAAGCATCCTGGATCACCAAAGCAACAAAATGAAAAATCAACCACAAAGCCCCCACTACCATTTAGTGCATCTCAGTTTCGCAAAGGAGCTTACCATGATTCGCTGGAGTTTGTGCAATCATTATGTGAGACATCATATGGCTTAGTGGATGTATTTCCAATTGAAGATCGAAAAAGTGCTCTGCGTGAGTCACTTGTAGAGATCAATTTACATGTAACAGATGCTCAGAACAATGGAGGAGTATGTTTTCCGTTGGGAAAGGGCATGTATCGTGTGCTGCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGAGAGAAGGCACCTTACCTAATCTGTGTTGAAGTTTTGAGATGTGAAATTCCAAGCAATTCCAAGGAGGCATCTAGCTCCCAGAAACTTTCCCAAGGTGGAATTCCTTTGGCAAATGGAGATGCTCTATTGCACAAGCCACCCCCTTGGGCTTATCCATTACGGACAGCACAAGAAGCATATCGAAATAGCAACGATAGGATGTCAAGATCTACTGCTCAAGCAATTGATCAGGCAATGACCCATGTACCCGAGTCAAAAAATAAATTTGTTAGTGTGAATCTTTCTGTGGAGAAACAATTACCTCGACAGACAGAGAAGACTGAATTGGCTAAACTACCTGGAAGTAGTCGAAATATTGCTTCAATTCACAGAAAGGGTGTACAGGGAAAAGCAGGACATGACAGTGATTTGGAATGGGTACGAGTAGTCTTGACAGCTGATCCTGGGGTTAGATTGGAAGATATTGAGGATCAAGCACCACCTCGGAGGAAGGAACATCGCCGTGTTCCAAGTACAATTGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGTGAAGCACCTCTTGGACTCCCTTTGAGAAGTTCTGGTCAAGATTCATCTGATGCACAACCAAGTGCTAATGGAATTATTCCCAAAGCTAGTGACGCCTTATCTGGTGAACTTTGGGAGGTGAAGAAAGAGAGAATACGCAAAGCTTCCGAAAATGGGAAGTTACCTGGTTGGGATCTGCGATCTGTTATTGTAAAGAGTGGTGATGATTGTAGACAGGAACATCTGGCTGTTCAACTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGACTACCTCTTTGGTTGCGCCCTTATGAAGTTTTATGTACTTCTTCGTATACAGCTCTTATTGAAACGATTCCAGATACGGCTTCTCTACATTCAATCAAAAGTAGACATCCCAACATCTCAAGTTTGCGTGAATTCTTCAATGCCAAGTATCAAGAAAATTCTCCAAGTTTCAAACTTGCCCAGAGGAACTTTGTTGAGAGTATGGCTGGGTATTCCCTTGTGTGCTACCTATTACAGGTGAAGGATAGGCATAATGGAAACCTTTTATTGGATGAAGAAGGTCACATCATACATATTGATTTTGGCTTCATGCTTTCCAACTCACCTGGTGGTGTTAATTTTGAAAGTGCACCTTTCAAGTTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAAGGTGTTCCAAGCGAGTTCTTTGATTACTTCAAGGTTTTATGCATTCAAGGGTTCCTTACTTGCCGCAAGCATGCTGAGCGAATTATTCTTCTTGTCGAGATGTTGCAGGATTCAGGCTTTCCATGCTTTAAAGGTGGTGCAAGAACAATACAGAATTTACGAAAGCGATTTCATCTGAGTTTAACAGAAGAGCAATGTGTCTCCTTGGTGCTTTCACTTATTAGCAGTAGTCTGGATGCGTGGAGGACACGGCAGTATGATTATTACCAGAAAGTTTTGAATGGAATATTGTGA 3318 0.4231 MVRLLGFIRGFDEPREITSRSNITGESSENGWLIRFFDSDFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGIESYLFQVCYMMIHKPSPSLDKFVIDVCAKSLKIALKVHWFLLAELEDSDDNEGISRVMEKCQIAATLMGEWPPLIRPQTETPSSGGKLNRLLSSKSRFLSLTSSPPSQKSLSFSPPSGNIVQEDGNPLSPDENKIFKKLIPSPKFRDALRFRKSVDKDNNDSEKDGFFKRLLKDSKGEDELGQKIRDAFSFRKSSEKDDEDSEKDNFFKRLLSSRDSKGDEEDSEKDGFLRRLLRDRGEDEDLTSSSEGFFKRLFRDSKNDSEDGSHTKTIEDAEKEGLFRKFFREKSEDRKEGSDRNDGVANSEEKCVKPVEEDEKEGFIRKFFKDKFEDKKDTNDKTEEGTANGEEEELFEFSLFKRLFRVHPEDAKRSPANENGNKGGLFESSPGTENFFRKLFKDRDRSIEDSELLGSKKQKEKHPGSPKQQNEKSTTKPPLPFSASQFRKGAYHDSLEFVQSLCETSYGLVDVFPIEDRKSALRESLVEINLHVTDAQNNGGVCFPLGKGMYRVLHIPEDEAVLLNSREKAPYLICVEVLRCEIPSNSKEASSSQKLSQGGIPLANGDALLHKPPPWAYPLRTAQEAYRNSNDRMSRSTAQAIDQAMTHVPESKNKFVSVNLSVEKQLPRQTEKTELAKLPGSSRNIASIHRKGVQGKAGHDSDLEWVRVVLTADPGVRLEDIEDQAPPRRKEHRRVPSTIAIEEVKAAAAKGEAPLGLPLRSSGQDSSDAQPSANGIIPKASDALSGELWEVKKERIRKASENGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRHPNISSLREFFNAKYQENSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGARTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQKVLNGIL* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3753 1105 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 847 861 IPR018936 GO:0016301
Amo13g3753 1105 MobiDBLite consensus disorder prediction 482 515 - -
Amo13g3753 1105 MobiDBLite consensus disorder prediction 362 390 - -
Amo13g3753 1105 SMART pi3k_hr1_6 844 1103 IPR000403 -
Amo13g3753 1105 PANTHER BNAA02G34040D PROTEIN 258 328 - -
Amo13g3753 1105 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 822 1090 IPR000403 -
Amo13g3753 1105 Gene3D - 47 138 IPR042236 -
Amo13g3753 1105 MobiDBLite consensus disorder prediction 175 201 - -
Amo13g3753 1105 Gene3D - 728 897 - -
Amo13g3753 1105 PANTHER BNAA02G34040D PROTEIN 8 254 - -
Amo13g3753 1105 PANTHER BNAA02G34040D PROTEIN 290 1105 - -
Amo13g3753 1105 SUPERFAMILY Protein kinase-like (PK-like) 557 1099 IPR011009 -
Amo13g3753 1105 MobiDBLite consensus disorder prediction 267 305 - -
Amo13g3753 1105 MobiDBLite consensus disorder prediction 175 209 - -
Amo13g3753 1105 Pfam Phosphatidylinositol 3- and 4-kinase 844 1051 IPR000403 -
Amo13g3753 1105 MobiDBLite consensus disorder prediction 787 810 - -
Amo13g3753 1105 Gene3D - 902 1103 IPR036940 GO:0016301
Amo13g3753 1105 MobiDBLite consensus disorder prediction 443 462 - -
Amo13g3753 1105 ProSiteProfiles PIK helical domain profile. 1 139 IPR001263 -
Amo13g3753 1105 CDD PI4Kc_III_beta 813 1105 - -
Amo13g3753 1105 MobiDBLite consensus disorder prediction 792 806 - -
Amo13g3753 1105 PANTHER PHOSPHATIDYLINOSITOL KINASE 8 254 IPR015433 GO:0046854|GO:0048015
Amo13g3753 1105 PANTHER PHOSPHATIDYLINOSITOL KINASE 290 1105 IPR015433 GO:0046854|GO:0048015
Amo13g3753 1105 MobiDBLite consensus disorder prediction 482 499 - -
Amo13g3753 1105 PANTHER PHOSPHATIDYLINOSITOL KINASE 258 328 IPR015433 GO:0046854|GO:0048015
Amo13g3753 1105 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 941 961 IPR018936 GO:0016301
Amo13g3753 1105 SUPERFAMILY ARM repeat 53 125 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3753 Amo-Chr13 126687227 126693420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3753 1 1104 Lipid Metabolism Gene Families AT5G09350 64.915 0.0 1478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3753 K19801 - gmx:100778394 1780.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3753 13 126687227 126693420 Amo13g3753 13 126687227 126693420 ECH
Amo13g3753 13 126687227 126693420 Amo10g2064 10 74406362 74415814 PCT
Amo13g3753 13 126687227 126693420 Amo20g2563 20 120182180 120191698 PCT
Amo10g2064 10 74406362 74415814 Amo13g3753 13 126687227 126693420 PCT
Amo20g2563 20 120182180 120191698 Amo13g3753 13 126687227 126693420 PCT