Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2064 ATGGTGAAGCTTTTAGGATTGAGTCGTGTCTGGGCCGATGAGCCCAGAGAAATCACGTCGAGGTCCAATTTGACCAGTGAGACCAGTGAGAATGGGTGGCTTATCAGGTTCTTTGATTCCTCCTTCTTCTGCGAGTGGATCGCAGTTAGCTACTTGTACAAGCATGACCATGCAGGGGTGCGCGATTACCTCTGCAATAGAATGTACACACTTCCATTGCAGGGAATTGAGAGCTATCTGTTCCAAGTGTGTTACATGATGATACATAAGCCTAGCCCCTCTTTGGATAAGTTTGTCATTGATATTTGCTCCAAGTCTCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTATTGGCTGAGCTTGAGGACAATGATGATGATAATGATAATGAAGCTATTAGTAGGATGCAGGAGAAGTGCCGGATTGCGGCCACCTTGATGGGTGAGTGGGTGCCCCTGATTAGGCCTCAAGGTTCATCTTCCAGCGTTGGAGGTAAGAACCAAGTTTTCAATAGGTTCTTGTCTTCAACACGCCGGTTGTCGATAACACCTACGCCTCCTCCTCAGAAGTCCATGTCTTTCTCGCCTTCTTCAGGAAAGAATTTGCAGGTGAACGTTAGTCCGCAGTCTCCTGATGAAAACAACTTGTTTAAGAAATTGTTGCCAAGTCCAAAGTTTAGAGATGCTTTGCTGTTTAGGAAGTCAGCGGAAAAAGATGACAATGATTCTGAGAAGGATGGCTTTTTCAAGAGGCTTTTAAGGGATAGCAAAGGTGAGGATGAGTTGGGCCAGAAAATCCGAGATGCATTTCACTTCAGAAAGTCAACCGAGAAATATGATGAAGACTCTGACAAGGATAATTTCTTTAAAAGGATCTTAAGGGACAATAGAGGTGATGATGAAGACTCTGAAAAGGATGGCTTCTTTAAAAGGCTCTTGAGGGACAATAAAGGCGAGGTGGAGGGTTCTCCCTCAAGTTCGGATGGAATTTTTAAGAGATTGTTTCGTGATAGCAAGAATGATTCTGAGGATAAAACACCGACCAAAATGATGGCAGAAGAGGAGAAAGAAGGATTTTTCCGTAAGTTTTTGAGGGAAAAATTTGAAGATAAGAAGGATTCGAATGATGAAGGAGAAAATGCTAATTCCGAAGAGAGAGGTGCAAAGCATTCTGAACAGGATGAAAAAGAAGGGTTTTTCCGAAAATTTGTTAAGGATATATTTGAAGACAAGAAAGATGCAAATGATAAAATTGAAGAAGGTACTGCCACTATTGAGGAGGAAGAGCCTTCTGAATTCCCTTTGTTCAAAAGATTATTTCGTGTGCACCCTGAAGATGGTAAAAGTAGTTCAACCAATGAAAACAACGGTGAAAGTAGTCCAGGTACAGAAAATTTCTTCCGCAAATTGTTTAGAGATCGTGAACGTTCAGTTGAAGATTCAGAACTATGGGGGTCGAATAAGCAGAAAGAGCAGAAGCATCCTGAATCACCTGAGAAATTTGCAACAAAACCTCCACTTCCATTCAATCAATCACATTTCCGTAAAGTAGCTTACCATGAGTCATTGGAATTTGTGCTGTCATTATGCGAGACATCGTTTGGGTTAGTTGATGTATTTCCAGTTGAAGACCGCAAACATGCTTTGCATGAGTCTCTAGCAGAGATCAATTTACATTTGACAGAGGCACAGAATACTGGAGGAGTTTGTTTTCCTTTGGGAAAGGGCATGTACCGTGTGCTTTATATTCCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCGCCTTACATGATCTGTGTTGAAGTATTGAGATGTGACATGACAAGCAATTCCAAGGACACGTCCAGTCCTCATAAACTTTCCAAAGGTGGAATTCCCTTGGCAAATGGAGATGCTCTCTTGCCAAAACCACCACCATGGGCTTATCCACTGTGGACAACACAAGAGGTTTATCGTAATAGCAATGATAGGATGTCAAGATCAACTGCTCGGGCAATTGACCAGGCAATGACTCATGTATCCGAGGCAAAAGTCAACTTTGTTAGTGTGAGTCTTTCTGTAGAATCACAATTACATGTTCAGCCAGAGAAAACTGAAGTGGATCTGCATGTTAGCAGTCGAGGTCCTTATAGTAACAGTGTTGGTGAAATGGCAAGGGGAGGACGTAACAGTGATGTGAAGTGCGTACGGGTAGTGCTGACCACTGATCCTGGGCTTAGAATGGAAGATATTGGGGAACAAGCACCTAGACGGCGGAGGGAACATCGTCGTGTGCCAAGTACAGTGGCAATAGAGGAAGTAAAAGCGGCGGCTGCTAAAGGGGAAGCACCTCTTGGACTTCCTTTGAAAGGTGCTGGTCAGGATTCATCAGATGCACAACCAAGGGCTAATGGAATTGCCCGCAAAGCGAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAGAGGATACGCAAGGCTTCCATTCACGGCAATTCACCTGGTTGGGACTTGAGATCTGTTATTGTAAAGAGCGGTGATGATTGCAGGCAGGAGCATCTGGCGGTTCAACTAATTTCACATTTCTATGATATCTTCCAAGAAGCAGGCCTACCTCTCTGGCTACGCCCTTATGAAGTTTTGTGTACATCATCTTACACAGCTCTTATCGAAACTATTCCAGACACGGCTTCTCTACATTCGATCAAGAGTAGATATCCCAACATCTCAAGTTTACGTGGGTTCTTTATTGCCAAGTATCAAGAAAATTCTCCAAGTTTCAAACTTGCCCAGAGGAACTTCGTTGAAAGTATGGCTGGATATTCCCTAGTCTGCTACCTTCTGCAGGTGAAGGATAGGCACAATGGGAACCTCTTATTGGATGAAGAAGGTCATATTATACATATTGATTTTGGCTTCATGCTTTCCAATTCACCTGGTGGTGTTAATTTTGAAAGTGCACCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAGGGCATTCCAAGTGAATTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTTCTTACTTGCCGTAAGCATGCTGAGCGAATAATTCTTCTTGTTGAGATGTTACAGGACTCTGGTTTCCCCTGCTTTAAAAATGGTCCACGGACAATACAGAACCTACGGAAGCGATTCCACCTCAGTTTAACGGAAGAGCAATGTGTATCATTGGTGCTTACTCTGATCAGCAGTAGCCTGGATGCATGGCGGACACGGCAGTACGACTATTACCAGAGGGTTTTGAATGGAATATTGTGA 3300 0.4318 MVKLLGLSRVWADEPREITSRSNLTSETSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGIESYLFQVCYMMIHKPSPSLDKFVIDICSKSLKIALKVHWFLLAELEDNDDDNDNEAISRMQEKCRIAATLMGEWVPLIRPQGSSSSVGGKNQVFNRFLSSTRRLSITPTPPPQKSMSFSPSSGKNLQVNVSPQSPDENNLFKKLLPSPKFRDALLFRKSAEKDDNDSEKDGFFKRLLRDSKGEDELGQKIRDAFHFRKSTEKYDEDSDKDNFFKRILRDNRGDDEDSEKDGFFKRLLRDNKGEVEGSPSSSDGIFKRLFRDSKNDSEDKTPTKMMAEEEKEGFFRKFLREKFEDKKDSNDEGENANSEERGAKHSEQDEKEGFFRKFVKDIFEDKKDANDKIEEGTATIEEEEPSEFPLFKRLFRVHPEDGKSSSTNENNGESSPGTENFFRKLFRDRERSVEDSELWGSNKQKEQKHPESPEKFATKPPLPFNQSHFRKVAYHESLEFVLSLCETSFGLVDVFPVEDRKHALHESLAEINLHLTEAQNTGGVCFPLGKGMYRVLYIPEDEAVLLNSREKAPYMICVEVLRCDMTSNSKDTSSPHKLSKGGIPLANGDALLPKPPPWAYPLWTTQEVYRNSNDRMSRSTARAIDQAMTHVSEAKVNFVSVSLSVESQLHVQPEKTEVDLHVSSRGPYSNSVGEMARGGRNSDVKCVRVVLTTDPGLRMEDIGEQAPRRRREHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGIARKASDALSGELWEAKKERIRKASIHGNSPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLRGFFIAKYQENSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKNGPRTIQNLRKRFHLSLTEEQCVSLVLTLISSSLDAWRTRQYDYYQRVLNGIL* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2064 1099 Gene3D - 762 891 - -
Amo10g2064 1099 SUPERFAMILY ARM repeat 54 125 IPR016024 -
Amo10g2064 1099 MobiDBLite consensus disorder prediction 317 397 - -
Amo10g2064 1099 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Amo10g2064 1099 PANTHER BNAA02G34040D PROTEIN 12 260 - -
Amo10g2064 1099 PANTHER BNAA02G34040D PROTEIN 290 1099 - -
Amo10g2064 1099 PANTHER BNAA02G34040D PROTEIN 264 333 - -
Amo10g2064 1099 SMART pi3k_hr1_6 838 1097 IPR000403 -
Amo10g2064 1099 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 935 955 IPR018936 GO:0016301
Amo10g2064 1099 MobiDBLite consensus disorder prediction 449 463 - -
Amo10g2064 1099 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 841 855 IPR018936 GO:0016301
Amo10g2064 1099 Gene3D - 896 1097 IPR036940 GO:0016301
Amo10g2064 1099 MobiDBLite consensus disorder prediction 445 464 - -
Amo10g2064 1099 MobiDBLite consensus disorder prediction 332 397 - -
Amo10g2064 1099 Pfam Phosphatidylinositol 3- and 4-kinase 838 1045 IPR000403 -
Amo10g2064 1099 Gene3D - 41 147 IPR042236 -
Amo10g2064 1099 MobiDBLite consensus disorder prediction 479 505 - -
Amo10g2064 1099 CDD PI4Kc_III_beta 807 1099 - -
Amo10g2064 1099 MobiDBLite consensus disorder prediction 179 216 - -
Amo10g2064 1099 PANTHER PHOSPHATIDYLINOSITOL KINASE 264 333 IPR015433 GO:0046854|GO:0048015
Amo10g2064 1099 PANTHER PHOSPHATIDYLINOSITOL KINASE 12 260 IPR015433 GO:0046854|GO:0048015
Amo10g2064 1099 PANTHER PHOSPHATIDYLINOSITOL KINASE 290 1099 IPR015433 GO:0046854|GO:0048015
Amo10g2064 1099 SUPERFAMILY Protein kinase-like (PK-like) 567 1092 IPR011009 -
Amo10g2064 1099 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 816 1084 IPR000403 -
Amo10g2064 1099 MobiDBLite consensus disorder prediction 479 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2064 Amo-Chr10 74406362 74415814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2064 1 1098 Lipid Metabolism Gene Families AT5G09350 67.986 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2064 K19801 - gmx:100781715 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2064 10 74406362 74415814 Amo20g2563 20 120182180 120191698 hybridization
Amo13g3753 13 126687227 126693420 Amo10g2064 10 74406362 74415814 PCT
Amo10g2064 10 74406362 74415814 Amo13g3753 13 126687227 126693420 PCT