Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2844 ATGAATGTGGCTAGATTGAGAGAGACATTATGTCACTTGCATGAGGGGTGTGTTGCTTCACGGATGAATGAGGATGTTGAACTGAACCTCCAGTTGCAGCTTCTTTTATTTGGTTATTATATCATATGTAGGTATCTGAGACGGGGTGTAAATGAGAAGGGCAGAGTAGCTAATGATGTTGAGACAGAACAAATTGTGTTTGAYGCTGTTCCTGAAGGTCTCCCTGTCCAAATAAGCTCRGTTGTCCAGAACAGGGGTTCYATCCCTCTTTTCTGGTCACAGGAGACTTCGCGTCTGAATCTTAAACCAGATATTATATTGTCAAAGAAGGATGAAAATTACCAAGCAACTAAACTTCACTTTGAGAATCTTGTCAAAAGATATGGGAACCCCATAATTATTTTGAATTTAATAAAGTCACGTGAGAGGAAGCCTCGCGAGTCAATACTCCGTTCAGAGTTTGCTAATGCAATTAATTTCATAAACAAAGATTTATCTGAGGAGAACAAGCTTAGGTTCCTTCATTGGGATCTGCACAGACATTTTCAGAGAAAATCTACAAATGTCTTGCGGCTTCTGGGAAAAGTGGCAGCACATGCCTTGTCACTAACAGGAATTTTCCATTGCCAAGCGACCCCTAACTTTAGAGCAGAAGACAGTGTGAAATGGCTATCTACTGATTTTGCATATTGCAATGTTGATAAAGGAAGCTTTCAACCTGCAAGGCATGTGGATGTTGACATTGAGGATGTTCSTAATCTTGAGAGGAAACCTGGTGGTGAGAACAATATTACTAATGGAAAGCAGTCTATCAAGCTTCCCATGTTCCAAAGAGGGGTGCTCAGGACCAATTGCATAGACTGCTTAGATCGCACGAATGTGGCGCAATATGCATATGGGTTAACTGCTCTTAGTCACCAGCTTCATGTSCTGGGAGTTATTGARGACCCAAAAATTGATCCTGATGATCCTCTAGGCGATGGTTTGATGGGATTTTATGAGCAGATGGGTGACACACTTGCACYTCAATATGGTGGTTCTGCTGCACACAACAAGATATTTTCTGAGAGGAGGGGTCAYTGGAGAGCTGCAACACAGTCACAGGAGTTTTTTAGGACTCTTCAACGGTATTACAGCAATGCCTACATGGATGCTGAGAAACAAAATGCAATTAACATATTTCTGGGGCATTTTCAGCCACAACAGGGTAGGCCTGCTTTGTGGGAGTTGGATTCAGATCAACATTATGATGTAGGGAGACATGGAGATGATGATGCAAGGTCAACTGTTAAACGATGTTTCTCAGATGGAAACATTCTTCGTGATAGTTCTGCACTTATATCAACCCTGCATCTCAAGCATGGAAGGTTAACTAAGCTAGATTTTCTAGACCAATCAGAAGATGGAAGCAGGGGTTTTTGTGATTCATCACCTGAAATATCAACTTGTGAGAGTGACATGTCTTTTTCAAGGTACACTCCTCCAGTGTCTCGGAGACACCTTTTTGGAGAGATGCAAAGAGACTGTTGCTTTGAAAYTGATCYAATTTTCTATTCTGAGCATCCAGAATCATTCAGCAGCTCCAACTTTGTTGACTTGAATTGGCTATCTTCAATAAATTCATGTGAAGAGGAGCATAAGAGGTCGTCAATTCCCAGGCTGTCTTCAAAAAGTGTTGGTAATGGAATTACTGGTGGAGATGCAACTGCTTCCACTAGTGAGTCAGGCTACAGGAARAAGGGTAGGAAGCAAAGTGGATCTGATGCATCCTACGACGATACCAGGTCCAAAATTCTAGAGGAATTTCCCAATACTTTTGTACAATGGGTGACTCATGGACAGACACTTTCTCATTGA 1857 0.4146 MNVARLRETLCHLHEGCVASRMNEDVELNLQLQLLLFGYYIICRYLRRGVNEKGRVANDVETEQIVFDAVPEGLPVQISSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDENYQATKLHFENLVKRYGNPIIILNLIKSRERKPRESILRSEFANAINFINKDLSEENKLRFLHWDLHRHFQRKSTNVLRLLGKVAAHALSLTGIFHCQATPNFRAEDSVKWLSTDFAYCNVDKGSFQPARHVDVDIEDVXNLERKPGGENNITNGKQSIKLPMFQRGVLRTNCIDCLDRTNVAQYAYGLTALSHQLHVLGVIEDPKIDPDDPLGDGLMGFYEQMGDTLAXQYGGSAAHNKIFSERRGHWRAATQSQEFFRTLQRYYSNAYMDAEKQNAINIFLGHFQPQQGRPALWELDSDQHYDVGRHGDDDARSTVKRCFSDGNILRDSSALISTLHLKHGRLTKLDFLDQSEDGSRGFCDSSPEISTCESDMSFSRYTPPVSRRHLFGEMQRDCCFEXDXIFYSEHPESFSSSNFVDLNWLSSINSCEEEHKRSSIPRLSSKSVGNGITGGDATASTSESGYRKKGRKQSGSDASYDDTRSKILEEFPNTFVQWVTHGQTLSH* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2844 618 MobiDBLite consensus disorder prediction 576 594 - -
Amo13g2844 618 MobiDBLite consensus disorder prediction 553 575 - -
Amo13g2844 618 Pfam SacI homology domain 43 182 IPR002013 GO:0016791
Amo13g2844 618 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 40 617 IPR043573 GO:0043813|GO:0046856
Amo13g2844 618 ProSiteProfiles Sac phosphatase domain profile. 44 346 IPR002013 GO:0016791
Amo13g2844 618 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 40 617 - -
Amo13g2844 618 MobiDBLite consensus disorder prediction 550 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2844 Amo-Chr13 62314007 62323006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2844 44 618 Acyl Lipid Metabolism Gene Families AT3G43220 54.655 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2844 K22913 - gmx:100786438 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2844 13 62314007 62323006 Amo13g2844 13 62314007 62323006 ECH
Amo13g2844 13 62314007 62323006 Amo03g1583 03 43404228 43407140 hybridization
Amo01g2679 01 97637236 97644840 Amo13g2844 13 62314007 62323006 PCT
Amo13g2844 13 62314007 62323006 Amo01g2679 01 97637236 97644840 PCT