Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2679 ATGCAGAAATTCAGGCTCTACGAGACTCGATCGAACTTTTATATGATAGGAAGGGACAAGAGCAGGACATATTGGAGAGTGTTAAAGATTGATCGCCTAGATCCTTGTGAGCTAAACTTGCGGGAAGATTCAACCACATACACAGAAAGTGAATGTTCTGATCTGTTGCGCCGGATACATGAGGGTAACAAGGCCACGGGTGGCCTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTCTGGGACCTTACTACATGCTGCTTATAACGAAAAGAAGGCAAATTGGTGCAATCTGTGGTCACACAGTATATGCTGTCTCAAAGACTGAGATGATTCCGCTGCCTAATTCTTTGGTTCGGCCTGATATCATCAATTCTAAACACGAAAACAGATACAAGAAGCTGCTGTGCACAGTCGACCTTACAAAGGATTTCTTTTTCAGCTACTCATATCACATTATGCGTAGTCTTCAAAGAAACATGTGTGATAATGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTGTGGAATGAATTCTTGACACGAGGAATTAGGAATCACCTCCAGAATACTCTTTGGACAGTTGCTCTAGTTTATGGCTATTTTAAACAGGACACACTAACGATATCTGGGCAGGATTTCATACTCACACTTATTGCAAGGCGATCACGTCATTATGCTGGAACTAGATATTTAAGGCGAGGTGTGAATGAGAATGGTAGAGTTGCTAATGATGTTGAGACAGAACAAATCGTATTTGAAGATGTTCCAGAAGGTCTACCCATCCAAATAAGTTCTGTTGTTCAGAACCGTGGTTCGATCCCTCTTTTCTGGTCGCAGGAAACTTCACGTCTAAATATTAAACCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCCACCAGACTTCATTTTGAAAATCTTATGAAAAGATATGGAAATCCCATAATAATTTTAAATTTAATAAAGACGCACGAGAAGAAGCCTCGTGAATCCATACTTCGCTCCGAGTTTGCTAATGCAATAGATTTCATTAATAAAGATTTATCTGAGGAGGACAGGCTTAGGTTCCTTCACTGGGATCTGCACAAACATTTTCAAAGCAAAGCTACAAATGTGTTGGTGCTTTTGGGCAAAGTGGCTTCATATGCCTTGACATTAACTGGTTTTTTCTACTGCCAAGTACCACCAACATTGAGGTCAGAAGATTATCTCAAATGGCCGTGTACTGATAATGTCGATAAGGAAAGCTTGTCACCTGCTGGACATGTTGGTGATGAAAACGAGGATGCTAATAATTTAGAGAGGAAATCTAGTGGACGAGATAATGATGCTGATGGAAATAATTCTATCAAACCACCCATGTTGCAGAGGGGTGTGCTCAGGACCAATTGCATAGACTGCTTAGATCGCACAAATGTTGCTCAGTATGCATATGGGTTGGCTGCACTTGGCCGCCAGCTCCATGCTTTGGGAGTTATAGAACACCCAAGGATTGACATCAATGATCCCGTAGCTGATGATCTTATGGGGTTTTATGAGCGGATGGGTGATACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAATAAGATATTTTCGGAGAGGAGAGGCCAATGGAGAGCTGCAATACAGTCACAGGAGTTCTTCAGGACTCTTCAACGCTATTACAGCAATGCATATATGGATGCTGAGAAACAAGATGCAATTAATGTATTCTTGGGAGATTTAGAGCCACATGGTAAACCTGCTCTATGGGAGTTGGGTGCAGATCAGCACTTTGATGCAGGGAGATATCGAGATGATGATGCAAGGTCAATTATGAAGAGATCCTTCTCAGACGGAAACATTCTTCGTGATACTTCTACACCTATGTCAGCCCCGGATGCCAAGGATGAACAATTCTCAAATGCAAGCATGCCAGACCGATCTGGAGAAGCAAGCAAGCCCTTTTGCGAGTCATCTCCTGATATATCTACTACTGAGAGTGACATGTCATTTTCAAGGTATACTCCCTCAATGCCTCGGAGACAGCTTTTTGGAGACATGCAACGAGAACGCTTCCATGAAAGTGACCATATTTACTATTCTGATCACGGGGATTCTTTCAGCTGCTCCAACTTTGTTGACTTGGATTGGCTATCTTCTTCTGGGAATTCATGTGAAGATGAGCTATATGACAGGTCATCAATTACCAACTCTCCAGTTACCGGGCTTTCTTCAGAAAATATTACCAATGGAATGGTAGAAGCTGCTCCATCCACTAGTGATTTGGCCAGTTCCAGCCTCAAGGGAAGGGAACGAGCTGAATCAGAGTTATCTTGTGGTAATGCACAAAGTGATGCCAAGTCCAACGTGCCGGATGAATTCCCTGACACTTTTGTTGAATGGGTAACTTATGGTCAGACACTTTGCCATTGA 2445 0.4209 MQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPCELNLREDSTTYTESECSDLLRRIHEGNKATGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKTEMIPLPNSLVRPDIINSKHENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTLWTVALVYGYFKQDTLTISGQDFILTLIARRSRHYAGTRYLRRGVNENGRVANDVETEQIVFEDVPEGLPIQISSVVQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYQATRLHFENLMKRYGNPIIILNLIKTHEKKPRESILRSEFANAIDFINKDLSEEDRLRFLHWDLHKHFQSKATNVLVLLGKVASYALTLTGFFYCQVPPTLRSEDYLKWPCTDNVDKESLSPAGHVGDENEDANNLERKSSGRDNDADGNNSIKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGRQLHALGVIEHPRIDINDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAAIQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGDLEPHGKPALWELGADQHFDAGRYRDDDARSIMKRSFSDGNILRDTSTPMSAPDAKDEQFSNASMPDRSGEASKPFCESSPDISTTESDMSFSRYTPSMPRRQLFGDMQRERFHESDHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEDELYDRSSITNSPVTGLSSENITNGMVEAAPSTSDLASSSLKGRERAESELSCGNAQSDAKSNVPDEFPDTFVEWVTYGQTLCH* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2679 814 MobiDBLite consensus disorder prediction 424 461 - -
Amo01g2679 814 MobiDBLite consensus disorder prediction 625 651 - -
Amo01g2679 814 MobiDBLite consensus disorder prediction 427 450 - -
Amo01g2679 814 Pfam SacI homology domain 76 373 IPR002013 GO:0016791
Amo01g2679 814 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 1 814 - -
Amo01g2679 814 MobiDBLite consensus disorder prediction 625 681 - -
Amo01g2679 814 ProSiteProfiles Sac phosphatase domain profile. 140 533 IPR002013 GO:0016791
Amo01g2679 814 MobiDBLite consensus disorder prediction 661 681 - -
Amo01g2679 814 MobiDBLite consensus disorder prediction 760 795 - -
Amo01g2679 814 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 814 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2679 Amo-Chr1 97637236 97644840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2679 1 814 Acyl Lipid Metabolism Gene Families AT5G20840 61.679 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2679 K22913 - gmx:100810079 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2679 01 97637236 97644840 Amo13g2844 13 62314007 62323006 PCT
Amo01g2679 01 97637236 97644840 Amo03g1583 03 43404228 43407140 PCT
Amo13g2844 13 62314007 62323006 Amo01g2679 01 97637236 97644840 PCT
Amo03g1583 03 43404228 43407140 Amo01g2679 01 97637236 97644840 PCT