Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1583 ATGGCGTCGTCGGAGAATGAGGCTTCGTATCACTCAACTTCTCCTGCCTCTGACGAACTGCGTTCTCTTCCTCCTGAACATACTTGTATCCAGAAGTTTAGGCTCTATGAGACTCTTTCGAACTTTTACATGATAGGAACGGATAAAAGCAATACTTATTGGAGAGTGCTAAAGATTGGCCGTTTAGATCCTTCTGAGCTAAATGTGCGTGAAGATTCTACCACATATACGGAAAGTGAAATATCTGATCTGCTGAGGCGTATTCATGAGGGGAATAAGTCCACGGGTGGACTGAAATTTGTGACAACTTGTTATGGAATTGTTGGCTTCATAAAATTTTTGGGGCCTTACTACATGCTTCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGCCATACAGTATATGCTGTTTCGAAGAGTGAGATGATTCCACTGAGAAGTTCTTCAGTTCAGTCTAACATGACTAATACTAAAAGTGAAAACAGATACAAGAAGCTCCTAAGTATGGTCGACCTTACAAAGGATTTCTATTTCAGCTACTCATACCACATAATGCGCAGTCTTCAAAGGAATTTGTGCGAAAATGAGACAGGCCATGTCCTTTATGAGACAATGTTTGTCTGGAATGAATTTTTGACTCAAGGAATTAGGAATAGCCTTCAGAATACTCTTTGGACAGTTGCGCTTGTGTATGGATTTTTTAAACAGGACACACTTGCAATATCTGGTCGGCAGTTCATACTTACACTAGTTGCAAGGAGGTCTCGTCATTATGCTGGCACTAGAATGCAGGAATCTCGATTTTCTGCAATTCTGGCAATACAGATCAAAGAGGGATTGATGATTGAGCAACCATGGTGGAGTGATGATGATGATTAG 885 0.4068 MASSENEASYHSTSPASDELRSLPPEHTCIQKFRLYETLSNFYMIGTDKSNTYWRVLKIGRLDPSELNVREDSTTYTESEISDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLRSSSVQSNMTNTKSENRYKKLLSMVDLTKDFYFSYSYHIMRSLQRNLCENETGHVLYETMFVWNEFLTQGIRNSLQNTLWTVALVYGFFKQDTLAISGRQFILTLVARRSRHYAGTRMQESRFSAILAIQIKEGLMIEQPWWSDDDD* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1583 294 ProSiteProfiles Sac phosphatase domain profile. 169 265 IPR002013 GO:0016791
Amo03g1583 294 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 22 265 - -
Amo03g1583 294 MobiDBLite consensus disorder prediction 1 19 - -
Amo03g1583 294 MobiDBLite consensus disorder prediction 1 22 - -
Amo03g1583 294 Pfam SacI homology domain 105 266 IPR002013 GO:0016791
Amo03g1583 294 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 22 265 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1583 Amo-Chr3 43404228 43407140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1583 30 264 Acyl Lipid Metabolism Gene Families AT3G43220 70.213 3.40e-117 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1583 K22913 - gmx:100786438 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2844 13 62314007 62323006 Amo03g1583 03 43404228 43407140 hybridization
Amo01g2679 01 97637236 97644840 Amo03g1583 03 43404228 43407140 PCT
Amo03g1583 03 43404228 43407140 Amo01g2679 01 97637236 97644840 PCT