Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3020 ATGGCGAGGCGAAAGACCGCTGTTCCTCTCTTTCTGCTTTGTTTTCTTCACATTCACTTTATTCTGATTCTGAACGTGCATGCCATTTTGGACCCAATTGATTTCTTAGCTCTTCAATCCATTCGGAAGAGTCTCCAAGACATGCCAGGTTCAACCTTTTTCTCCGATTGGGACTTCACTTCCGATCCCTGCAACTTCTCCGGCGTGTTCTGTGATTCGGACAGGGTTGTTTCTCTTAACCTTGGCGACCCGAGAGCCGGCTCGCCCGGTCTTACCGGTCGGATAGACCGGGCGATTGGGAAACTCTCTTCGCTTGCCGAGTTTACTGTCGTTCCGGGGAGAATCTACGGTAGATTGCCGGAGTCAATTTCCGATTTGAAGAACTTGAGGTTCCTTGGAATCAGCCGGAATTTCATCTCCGGCGAGATTCCGTCAGGGTTGGGTGGTCTCCGGCTGTTAAGGACCGTTGATCTCAGCTTTAACCAGCTCGCCGGAGTAATTCCTCCGGCGATCGGATCTTTGCCGGAGCTTACTAACCTCATGCTCTGCCACAACAAGCTAACCGGTTCAACTCCGCGGTTCGAGTCGAAAACCCTATCCCGGGTTGATTTGAAGCACAATGCTCTATCCGGTTCGCTTGGACCAAACCACTTTCCACCTTCTATGCTGTATTTGTCACTGGCGCGGAACCAGTTGACCGGTCCGGTGGACCAGCTTCTGAACCGGTTGGATCAGCTTAATTACCTTGACCTGAGCCTGAACCGGTTCACGGGGCCAATCCCCGGAAGGATCTTCTCGTTCCCTTTAACGAACCTACAATTGGAGAGGAACCAGTTCTCTGGTCCGGTTAGGCCATTGGATCAGGTCTCAATTGCAACGGTTGATCTAAGCTACAACCGATTTTATGGTCAAATATCGCCGATGCTCGCATCGGTTCAGAACCTATACTTGAACAATAACCGGTTCACGGGGCGAGTTCCTGCTAGCTTCGTGAACCGGTTGTTGGACTCAAGCATTCAGATACTGTATTTGCAGCATAACTACCTGACTGGAATTGAGATTAGTCCAACGGCCGTGATTCCTCTAAGGAGTTCACTGTGTCTTCAGTATAATTGCATGGTCCCTCCCGTAGAGACTCCATGTCCCTTGAGGGCTGGGAAAGAGAAGACAAGGCCTATTGCTCAGTGTAACCAATTGAAAGGATGA 1206 0.5033 MARRKTAVPLFLLCFLHIHFILILNVHAILDPIDFLALQSIRKSLQDMPGSTFFSDWDFTSDPCNFSGVFCDSDRVVSLNLGDPRAGSPGLTGRIDRAIGKLSSLAEFTVVPGRIYGRLPESISDLKNLRFLGISRNFISGEIPSGLGGLRLLRTVDLSFNQLAGVIPPAIGSLPELTNLMLCHNKLTGSTPRFESKTLSRVDLKHNALSGSLGPNHFPPSMLYLSLARNQLTGPVDQLLNRLDQLNYLDLSLNRFTGPIPGRIFSFPLTNLQLERNQFSGPVRPLDQVSIATVDLSYNRFYGQISPMLASVQNLYLNNNRFTGRVPASFVNRLLDSSIQILYLQHNYLTGIEISPTAVIPLRSSLCLQYNCMVPPVETPCPLRAGKEKTRPIAQCNQLKG* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3020 401 Gene3D Ribonuclease Inhibitor 197 373 IPR032675 -
Amo12g3020 401 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Amo12g3020 401 SUPERFAMILY L domain-like 44 373 - -
Amo12g3020 401 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Amo12g3020 401 PANTHER LRR RECEPTOR-LIKE KINASE 10 398 - -
Amo12g3020 401 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3020 Amo-Chr12 117830964 117832932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3020 37 351 Receptor kinase-like Gene Family AT5G62230 32.416 1.03e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3020 - - gmx:100800224 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3020 12 117830964 117832932 Amo12g3020 12 117830964 117832932 ECH
Amo16g0055 16 809816 811088 Amo12g3020 12 117830964 117832932 PCT
Amo06g0441 06 6268341 6269680 Amo12g3020 12 117830964 117832932 PCT
Amo12g3020 12 117830964 117832932 Amo16g0055 16 809816 811088 PCT
Amo12g3020 12 117830964 117832932 Amo06g0441 06 6268341 6269680 PCT