Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2941 ATGCCACATTCTCTTTCACCATGGAGCTTCACCTTCTTCTTACTCTTCTTTACTTTCTTCTTTCTTCCCATTCCAACCCTACAAACAACTCTAATCTCACCAGTTTCAAAGGACAAATCCACCAACCTCTTCACTCTTTCTGTGTACCTCAAAACCCCACTTCGCCCCACGAAACTCTTCCTTGACCTCGCTTTCTTGTTCCCATGGACACTTTGTGATGCTAACTACAACTCCTCCTCTTTTCGCTATGTCGATTGCGATCGCACCTTTTGTTTTTACCTCGGCTTCGGTGGAGCTTCTTGCAGCAACTGCACCGAAGCCGGTCTCTCCGACCCTAACTGCATTCCAGAAAATCCCATATGCGTCGTTAGAGACTATGATTTTGATGCCACGCTTATTGACACGCTGGCACTTCCTAATGCTGACGTGTCAACTAAAACCCACCTTATTTCTCTTCCAAATTACACGTTTTCTTGTGCACACTCTTCTCTTCTTAAAGGCTTACCAAAAGAAGTAACCGGTTTAGCTTCATTGAGCCGTTACAATCTCTCTCTTCCGAATCAAATTAGTTCGACTCTCTCGGTTCCTAACACTTTTGCGGTTTGTTTTCCTGGTTCATCTAAATCAACCGGAGTTGCTTTCTTTGGATCCAAAGGACCCTACTACGCTTTTTTCCAAAATTCCAAAATTGACCTTTCGAAATCACTTATTTACACTCCACTCATTGTGAATCCAGACGGCATTGGCGATACTGTGATTTCTTATTCCGATGACCCACCTTCCTATGAGTATTTCGTTAACCTAACTTCCATTAGAATCAACGGTCAAAATGTCCCCATCAATGTTTCTCTATTGAATATTGATCATGAAAACTTTTTGGGTATTGGTGGCACCAAGTTTAGTAGTAACACTCCGTACACTCTTTTAGAAAGTTCTATCTACAAAGCATTTACGAAATTGTTCATAAAAGAGGCAAGTTCGTCTAGGTTTAACCTCACGAGAACTAGTTCAGTAAAACCTTTTAGCGTGTGCTATGCCGCGAGATTGGTCAAAGTGACAAGTATAGGTCCGGATGTGCCGACCGTTGAGCTTGAGTTGGGAGGGAAGAAGGGTGTGGTGTGGAGGATTGTGGGTGCAAACTCAATAGTGAGGGTTAAGAATAAGAAAAATAATTTGGATTTGTGGTGTTTGGGTTTTGTTGATAATGGAGTGAATAAGAAGACATCCATTGTGATTGGTGCCAAGCAACTTGAAGAGAACCTTATGCAGTTTGATATTGAATCTAACAAATTAGGGTTCACCTCTTTGCTTACGTCTCACTCACTCAAATGTAGTCATTTTAATGTCACTGATTTTGCAAAAAATAATTAG 1371 0.4136 MPHSLSPWSFTFFLLFFTFFFLPIPTLQTTLISPVSKDKSTNLFTLSVYLKTPLRPTKLFLDLAFLFPWTLCDANYNSSSFRYVDCDRTFCFYLGFGGASCSNCTEAGLSDPNCIPENPICVVRDYDFDATLIDTLALPNADVSTKTHLISLPNYTFSCAHSSLLKGLPKEVTGLASLSRYNLSLPNQISSTLSVPNTFAVCFPGSSKSTGVAFFGSKGPYYAFFQNSKIDLSKSLIYTPLIVNPDGIGDTVISYSDDPPSYEYFVNLTSIRINGQNVPINVSLLNIDHENFLGIGGTKFSSNTPYTLLESSIYKAFTKLFIKEASSSRFNLTRTSSVKPFSVCYAARLVKVTSIGPDVPTVELELGGKKGVVWRIVGANSIVRVKNKKNNLDLWCLGFVDNGVNKKTSIVIGAKQLEENLMQFDIESNKLGFTSLLTSHSLKCSHFNVTDFAKNN* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2941 456 Pfam Xylanase inhibitor N-terminal 45 217 IPR032861 -
Amo12g2941 456 Gene3D Acid Proteases 25 217 IPR021109 -
Amo12g2941 456 Gene3D Acid Proteases 219 452 IPR021109 -
Amo12g2941 456 PANTHER OS05G0403000 PROTEIN 13 448 - -
Amo12g2941 456 PANTHER ASPARTYL PROTEASE-RELATED 13 448 IPR001461 GO:0004190|GO:0006508
Amo12g2941 456 ProSiteProfiles Peptidase family A1 domain profile. 44 434 IPR033121 -
Amo12g2941 456 Pfam Xylanase inhibitor C-terminal 263 434 IPR032799 -
Amo12g2941 456 SUPERFAMILY Acid proteases 36 443 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2941 Amo-Chr12 116624125 116627053 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2941 - - ahf:112730611 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2941 12 116624125 116627053 Amo12g2941 12 116624125 116627053 ECH
Amo16g0018 16 366165 367472 Amo12g2941 12 116624125 116627053 PCT
Amo06g0484 06 6799497 6801307 Amo12g2941 12 116624125 116627053 PCT
Amo12g2941 12 116624125 116627053 Amo16g0018 16 366165 367472 PCT
Amo12g2941 12 116624125 116627053 Amo06g0484 06 6799497 6801307 PCT