Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0467 ATGGCCATCCAGGCAGTTTCAAAGATGGCAGGGTGCAGTGAAACAGCTGCCAAAAGTCAATTCTTTTTGATTGATAAAGATGGTCTTGTCACAACTGATAGGAATAATCTAGATCCAGCTGCAGCTCCATTTGCTAAAAACCCAAGAGACCTAGAAGGGCTCACTGAGGGTGCTAGTATAATTGAAGTGGTGAAGAAGGTTAGACCACATGTTCTCCTTGGTTTGTCTGGGGTTGGTGGCATTTTCAATGAGGAGGTGCTTAAGGCAATGAAAGAATCTGTTTCAACAAAACCTGCCATCTTTGCCATGTCTAACCCTACCATGAATGCTGAGTGCACTGCTATTGATGCTTTTAAGCATGCCGGTGGAGATATCGTATTTGGAAGTGGTAGCCCTTTCGAAAATGTAGATCTTGGTAATGGAAAAGTGGGTCATGTAAATCAAGCCAACAACATGTATCTGTTCCCAGGAATCGGTCTAGGATCACTTTTGTCAGGTGCTCGGCTAATAACAGATGGAATGTTGCAGGCTGCTGCTGAATGCCTTGCTTCATACATGTTAGAGGAAGATATCTCAAAAGGAATCTTGTATCCATCCATTGATAGCATTCGAAATGTAACAGCAGAGGTTGGTGCTGCTGTTCTTCGAGCAGCAGTTGAAGACAACTTGGCAGAAGGGCATGGTGATGTAGGGCCCAAGGAACTTGCAAAGATGTCAAAAGAGGAGACGGTGGAGTATGTCGCAAGAAATATGTGGTACCCTGTGTATTCTCCTCTTGTTCATGAAAAATAG 792 0.4381 MAIQAVSKMAGCSETAAKSQFFLIDKDGLVTTDRNNLDPAAAPFAKNPRDLEGLTEGASIIEVVKKVRPHVLLGLSGVGGIFNEEVLKAMKESVSTKPAIFAMSNPTMNAECTAIDAFKHAGGDIVFGSGSPFENVDLGNGKVGHVNQANNMYLFPGIGLGSLLSGARLITDGMLQAAAECLASYMLEEDISKGILYPSIDSIRNVTAEVGAAVLRAAVEDNLAEGHGDVGPKELAKMSKEETVEYVARNMWYPVYSPLVHEK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0467 263 Gene3D - 1 263 - -
Amo12g0467 263 PANTHER MALIC ENZYME-RELATED 1 259 - -
Amo12g0467 263 SMART Malic_M_2 2 219 IPR012302 GO:0051287
Amo12g0467 263 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 260 IPR036291 -
Amo12g0467 263 PIRSF ME 1 262 IPR001891 GO:0004470|GO:0004471
Amo12g0467 263 Pfam Malic enzyme, NAD binding domain 4 218 IPR012302 GO:0051287
Amo12g0467 263 PANTHER MALIC ENZYME 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0467 Amo-Chr12 7572542 7576276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0467 K00028 - gmx:100806545 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0467 12 7572542 7576276 Amo12g0467 12 7572542 7576276 ECH
Amo12g0467 12 7572542 7576276 Amo02g0620 02 8039555 8045874 hybridization
Amo14g3386 14 136368537 136376044 Amo12g0467 12 7572542 7576276 PCT
Amo04g2943 04 104864092 104871264 Amo12g0467 12 7572542 7576276 PCT
Amo12g0467 12 7572542 7576276 Amo14g3386 14 136368537 136376044 PCT
Amo12g0467 12 7572542 7576276 Amo04g2943 04 104864092 104871264 PCT