Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1089 ATGGATTGCTTAGAACTCTACAAACAGAGGAATTTGAAAGAGGAAGGAGAAGAAGAAGAGGTGACACTTGATGGGAGTGTCGATTGGAATGGACGCCCTGCTATCAGATCCAAATCTGGAACATGGGTTGCTGGAACTATCATACTCTTGAATCAAGGTTTGGCAACTTTAGCATTCTTTGGGATTGGAGTGAACTTGGTTCTGTTCCTAACAAGGGTGATGGGGCAGAATAATGCTGATGCTGCTAATAGTGTGAGCAAGTGGACTGGCACTGTTTATATCTTCTCTCTTGTTGGGGCTTTTCTTAGTGATTCTTATTGGGGAAGATACAAAACTTGTGCCATCTTTCAGGTCATCTTTGTCATGGGTCTAATATCCTTATCACTATCATCGTACCTATTCTTGATTAGACCTAAAGATTGTGGGAATGAGACAGTTGTATGTGGGAAACATTCAAGCATGGAGATGGGGATGTTCTACCTCTCAATCTATCTCATTGCTCTAGGAAATGGAGGATACCAACCAAACATTGCAACATTTGGGGCTGATCAATTTGATGAAGAGCACTCAAAGGAAGGTTACTCAAAAGTGGCATTCTTTAGCTACTTCTACTTGGCTTTGAACCTTGGTTCCCTCTTCTCAAACACAATTCTGGGCTACTTTGAAGATGAAGGATTGTGGACACTTGGATTTTGGACATCTGCAGGGTCTGCCTTTGCTGCCCTGCTCTTGTTTCTCGTCGGCACGCCGAGATATCGACACTTTAAGCCTTGCGGCAACCCTCTTTCCAGGTTTTGCCAAGTCCTTGTGGCGGCGTCAAGGAAGTGTGGAGTTCAAATGACACCAAATGGAGATGACTTGTATGTCTTGGATGAAAAGGAATCTCCCAACAATGGCAATAGAAGGATTCTTCACACCCATGGATTCAAGTTTCTGGATAGGGCGGCATTTATTTCTTCAAGAGATCTAGAGGACAAAAAAGGAGGCATCAACAACCCTTGGCACCTTTGTCCTATAACTCAAGTTGAAGAAGTGAAGTGCATACTAAGGCTTCTTCCAATATGGCTCTGTACCATTATATACTCAGTGGTTTTCACACAAATGGCATCTCTCTTTGTGGAGCAAGGGGCTGCCATGAAAACAACAATCTCCGATTTCAAAATACCCCCAGCAAGCATGTCCAGTTTTGACATCCTTAGTGTAGCTGTCTTCATTTTCTTCTACCGTCGAGTGCTCGATCCGCTTGTCGGGAAACTGAAAAAGACAAGCTCCAAGGGACTTACAGAGCTTCAAAGAATGGGAGTTGGTCTTGTTATAGCCATAATGGCGATGGTTTCGGCCGGAATAGTCGAATGCTATAGGCTTAAGTATGCAAACCAAGGATGTCTCCATTGTAGTGGCTCAAGCTCTCTAAGCATCTTCTGGCAAATTCCTCAGTATGCCCTTATAGGAGCTTCTGAGGTTTTCATGTATGTAGGGCAACTAGAGTTCTTCAATGCTCAAACCCCAGATGGATTAAAGAGCTTTGGAAGTGCACTTTGCATGACATCAATCTCATTAGGGAACTATGTGAGTTGCTTACTAGTTAGCATGGTTATGAAGGTCTCAACTGAGGATCACATGCCAGGGTGGATCCCTGGAAACCTTAATAGAGGTCACTTAGATAGGTTTTTCTTTCTCCTCGCCGCATTAACATCCGTAGACTTGATCGCTTATATTGCCTGTGCCAAGTGGTTCAAAAGTATACAATTGGAAGGGAAGGATGAAGATGATGATCACCATACAAGTTGCAAAGTCTGA 1800 0.4339 MDCLELYKQRNLKEEGEEEEVTLDGSVDWNGRPAIRSKSGTWVAGTIILLNQGLATLAFFGIGVNLVLFLTRVMGQNNADAANSVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQVIFVMGLISLSLSSYLFLIRPKDCGNETVVCGKHSSMEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWTLGFWTSAGSAFAALLLFLVGTPRYRHFKPCGNPLSRFCQVLVAASRKCGVQMTPNGDDLYVLDEKESPNNGNRRILHTHGFKFLDRAAFISSRDLEDKKGGINNPWHLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISDFKIPPASMSSFDILSVAVFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGVGLVIAIMAMVSAGIVECYRLKYANQGCLHCSGSSSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSCLLVSMVMKVSTEDHMPGWIPGNLNRGHLDRFFFLLAALTSVDLIAYIACAKWFKSIQLEGKDEDDDHHTSCKV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1089 599 Gene3D MFS general substrate transporter like domains 13 588 IPR036259 -
Amo11g1089 599 Pfam POT family 110 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo11g1089 599 CDD MFS_NPF7 42 578 - -
Amo11g1089 599 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 588 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo11g1089 599 PANTHER PEPTIDE TRANSPORTER 17 588 - -
Amo11g1089 599 SUPERFAMILY MFS general substrate transporter 32 590 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1089 Amo-Chr11 32657631 32664613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1089 1 598 Organic Solute Cotransporters AT1G32450 76.277 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1089 K14638 - gmx:100808276 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g1520 01 31618774 31625791 Amo11g1089 11 32657631 32664613 hybridization
Amo05g0467 05 5424228 5428405 Amo11g1089 11 32657631 32664613 PCT
Amo11g1089 11 32657631 32664613 Amo05g0467 05 5424228 5428405 PCT