Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0467 ATGCATATGTGCACACTTATATTAGAAGCATACTCGAAAGGAGCACTGAACCAAGGTCTGGCAACCCTTGCATTCTTTGGAGTTGGAGTGAACCTGGTGCTGTTCCTGACAAGGGTGGTAGGACAAAACAATGCTGAAGCAGCAAACAATGTGAGCAAGTGGACTGGGACTGTTTACATCTTCTCTCTCGTGGGTGCTTTCCTAAGTGATTCTTACTGGGGAAGATACAAAACTTGTGCTGTTTTTCAAGTCATCTTTGTACTCGGTCTATCATCCTTATCCCTATCATCATACCTCTTCTTGGTTAAGCCTAAAGGTTGTGGGAATGAATTGGTTCAATGTGGGAAACATTCAAGGTTGGAGATGGGGATGTTCTACCTTTCAATCTATCTCATCGCCCTGGGCAATGGAGGCTATCAACCCAATATTGCCACATTTGGGGCAGATCAGTTTGATGAGGAGCACTCAAAGGAGGGTCCCTCAAAGGTGGCATTTTTTAGCTATTTCTACCTGGCTTTGAACCTTGGCTCCCTCTTCTCAAACACCATTCTAGGCTATTTTGAAGATGAAGGAATGTGGGCACTTGGGTTCTGGGTATCTGCAGGCTCTGCCTTAGCCGCACTTATTTTGTTCCTTGTAGGCACACCAAGGTATAGGCACTTCAAGCCCAGTGGCAACCCTCTCTCCAGATTTTGCCAAGTTCTTGTTGCTGCATCAAGGAAATGGAAAGTCCAAATGCCATCAAATGAAGAGGAGTTATATGATAAGCATACAATAGATTCTGCCACCAACAGCAACAGAAAGATTCTCTACACTCACGGGTTCAATTTGCATGAATTCTTTTCCTGCATTCATGTAACCATTTTGCTAAGACCATGGCATAGGTTCTTGGATAGGGCAGCATATATATCCTCAAGAGATCTAGAGGACCAAAAGAATTCCCTTTACAACCCTTGGCACCTCTGTCCTATAAGTCAGGTTGAAGAAGTTAAATGCATACTGAGACTTCTTCCAATTTGGCTTTGCACCATAATATACTCAGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAACAAGGTGCAGCCATGAAAACCACTATTTCTCATTTCAGAATACCACCGGCTAGCATGTCAAGCTTTGATATCCTCAGTGTAGCTGTCTTCATTTTCTTTTACCGTCGAGTTCTTGATCCGTTTGTGGGAAAACTTAAGAAGTCAGACTCTAAGGGTCTTACTGAACTTCAAAGAATGGGAGTCGGACTCGTCATAGCTGTACTAGCAATGGTTTCTGCCGGGTTAGTTGAATGCTATAGGCTTAGGTATGCCAAACCAGGATGCATCCACTGCAATGGCACAAGCTCTCTAAGCATCTTCTGGCAAATCCCTCAGTATGCATTTATAGGAGCTTCTGAAGTGTTTATGTATGTAGGCCAGTTAGAGTTCTTCAATGCTCAAACACCCGATGGCTTAAAGAGCTTTGGAAGTGCACTTTGCATGACATCCATCTCCCTTGGGAACTATGTCAGCAGCTTACTTGTAAGCATGGTTATGAAGATATCCACTGAGGATCACATGCCTGGGTGGATCCCTGGAAACCTCAACAGAGGCCACCTAGATAGGTTTTACTTTCTCTTAGCGGTCTTGACATCTATGGACTTGATCGCTTATATTGCATGTGCAAAGTGGTACAAGTGTATCCAACTGGAAGGGAAATGTGAAGAGCATGATGAGGCAAGTAGTTTCAAAGTCTAA 1755 0.4359 MHMCTLILEAYSKGALNQGLATLAFFGVGVNLVLFLTRVVGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVLGLSSLSLSSYLFLVKPKGCGNELVQCGKHSRLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGPSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSAGSALAALILFLVGTPRYRHFKPSGNPLSRFCQVLVAASRKWKVQMPSNEEELYDKHTIDSATNSNRKILYTHGFNLHEFFSCIHVTILLRPWHRFLDRAAYISSRDLEDQKNSLYNPWHLCPISQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISHFRIPPASMSSFDILSVAVFIFFYRRVLDPFVGKLKKSDSKGLTELQRMGVGLVIAVLAMVSAGLVECYRLRYAKPGCIHCNGTSSLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSMVMKISTEDHMPGWIPGNLNRGHLDRFYFLLAVLTSMDLIAYIACAKWYKCIQLEGKCEEHDEASSFKV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0467 584 Pfam POT family 76 523 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo05g0467 584 CDD MFS_NPF7 16 563 - -
Amo05g0467 584 PANTHER PEPTIDE TRANSPORTER 14 573 - -
Amo05g0467 584 Gene3D MFS general substrate transporter like domains 7 571 IPR036259 -
Amo05g0467 584 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 573 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo05g0467 584 SUPERFAMILY MFS general substrate transporter 17 570 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0467 Amo-Chr5 5424228 5428405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0467 16 577 Organic Solute Cotransporters AT1G32450 75.221 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0467 K14638 - gmx:100778608 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0467 05 5424228 5428405 Amo01g1520 01 31618774 31625791 PCT
Amo05g0467 05 5424228 5428405 Amo11g1089 11 32657631 32664613 PCT
Amo01g1520 01 31618774 31625791 Amo05g0467 05 5424228 5428405 PCT
Amo11g1089 11 32657631 32664613 Amo05g0467 05 5424228 5428405 PCT