Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0729 ATGGGCTTTGACTTGGGGCTTTTGTCCTTCAATGCACCAAACTTGAGTCTTGTTTCTCCTCCCTTTTCTCACTATTCTCCTAGAATCTTCCTTAGTTTTTGTGGAATAATGGTAGTAGAAGAAGGAAGCTTTTTCAACAAGGATGTTCTAGTAATAAAGGCTCAGAAGAAATCACCACTTGTATTGAGGATGTCAGTGTTGGTATTCTCAATGGTGTGTGGGGTTTTTATTTGCTGTGTTTGTTTGAAGCAGATAAGGACTCAAGCAAGGACTAAACTTTTGGAGTTACAAACCATTCAGAACCCTTCTTCCCAGAGTGTACTGAAGATAACAGATACACACCTTCACTACCCTAACCCTGTCTCTTTTAATAGGTACTCCTTGTGTGCACAATATTTGAATGAGTGTGCTCGAAACCCTGTGCATTTCTTTGCCATATTGTCAAACCAAAGGTCAGGGAGTGGGTGGTTTGAGACCCTTTTGAATAGCCACATAAATGTGAGCTCAAATGGGGAGATATTTTCTGTAAGAGAGAGAAGAATGAATGCTTCCACAATTGTGAAGACTTTGGATAAAGTTTATAGTTTGGACTGGGTCAGTAGTGCTTCAAAGAATGAGTGCTCTGCTGCAGTTGGCTTAAAGTGGATGCTTAATCAGGGGCTGATGGAGCACCCCAAGGAAATAGCAGACTACTTCAACCATAGAAGTGTTTCTGTAATATTTCTTTTGCGGAGAAACTTGTTACGCAGATTGGTATCAACGCTGGCCAATTCCTACGATCGTTATGCCAAGTTATTGAATGGGACTCATAAGTCTCACGTTCATTCCACAGAAGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTTGTATTGAATTGTGCATTATTTAGGAAGGACACTGGTGTCTCTGGCATAGCTGATACTCTATTACAGTACAAGCCTGCCATAAATTCTACATCATTGCTGACCAACTTGAAAGATATGGAGACAAGAGTTGCAAAGGCGTTAGAATACTTCAGCACTACTCGGCATATGATCCTGTACTATGAGGATCTTATACGAAATCCTACTGATTGCCGCAGATGGAGTTAA 1098 0.4107 MGFDLGLLSFNAPNLSLVSPPFSHYSPRIFLSFCGIMVVEEGSFFNKDVLVIKAQKKSPLVLRMSVLVFSMVCGVFICCVCLKQIRTQARTKLLELQTIQNPSSQSVLKITDTHLHYPNPVSFNRYSLCAQYLNECARNPVHFFAILSNQRSGSGWFETLLNSHINVSSNGEIFSVRERRMNASTIVKTLDKVYSLDWVSSASKNECSAAVGLKWMLNQGLMEHPKEIADYFNHRSVSVIFLLRRNLLRRLVSTLANSYDRYAKLLNGTHKSHVHSTEEVSLSLSLSLSPFVLNCALFRKDTGVSGIADTLLQYKPAINSTSLLTNLKDMETRVAKALEYFSTTRHMILYYEDLIRNPTDCRRWS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0729 365 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 40 282 - -
Amo11g0729 365 Gene3D - 142 363 IPR027417 -
Amo11g0729 365 PANTHER SULFOTRANSFERASE 308 360 - -
Amo11g0729 365 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 308 360 - -
Amo11g0729 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 266 IPR027417 -
Amo11g0729 365 PANTHER SULFOTRANSFERASE 40 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0729 Amo-Chr11 14904209 14908419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0729 - - gmx:100795357 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3879 16 150587505 150592162 Amo11g0729 11 14904209 14908419 ECH
Amo11g0729 11 14904209 14908419 Amo11g0729 11 14904209 14908419 ECH
Amo01g0010 01 568590 572564 Amo11g0729 11 14904209 14908419 hybridization
Amo11g0729 11 14904209 14908419 Amo05g1033 05 13633886 13636947 PCT