Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0010 GGTTCCTTCAATGCACCAAACTCGAGTCTTGATTCTCCTCCCTTTTCTCACTATTCTCCTAGAATCTTCCTCAGTTTTTGTGGAATAATGGTAGTAGAAGAAATGTGCTTCTTCAACAAGGATGTTCTAGTAATAAAGGCTCAGAAGAAATCACCACTTGTATTGAGGATGTCAGTGTTGGTATTCTCAATGGTGTGTGGGGTTTTTATTTGCTGTGTTTGTTTGAAGCAGATAAGCACTCAAGCAAGGGCTAAACTTTTGGAGTTACAAACCATTCAGAACCCTTCTTCCCAGAGTGTACTGAAGATAACAGATCACACCTTCACTACCCTAACCCTGTCTCTTTTAATAGGTACTCCTTTGTGCTCGAAACCCTGTGCATTTCTTTGCCATATTGTCAAACCAAGGTCAGGGAGTGGGTGGTTTGAGACCCTTTTGAATAGCCACATAAATGTGAGCTCAAATGGGGAGATATTTTCTGTAAGAGAGAGAAGAATGAATGCTTCCACAATTGTGAAGACTTTGGATAAAGTTTATAGTTTGGACTGGGTCAGTAGTGCTTCAAAGAATGAGTGCTCTGCTGCAGTTGGCTTAAAGTGGATGCTTAATCAGGGGTTGATGGAGCACCCCAAGGAAATAGCAGACTACTTCAACCATAGAAGTGTTTCTGTAATATTTCTTTTGCGGAGAAACTTGTTACGCAGATTGGTATCAACGCTGGCCAATTCGTACGATCGTTATGCCAAGTTATTGAATGGGACTCATAAGTCTCACGTTCATTCCACAGAAGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTTGTATTGCTGATACTCTATTGCAGTACAAGCCTGCCATAAATTCTACATCATTGCTGACCAACTTGAAAGTTATGGAGACAAGAGTTGCAAAGGCGTTAGAATACTTCAGCGCTACTCGGCATATGATCCTGTACTATGAGGATCTTATACAAAATCCTACTGAGCTAAAAGGTGTGCTAGACTTTTTAGGATTGCCGCAGATGGAGTTAACGAGCCGGCAGGTTAAGATCCATAGAGGACCGTTATCCGACCACATTAAAAACTGGGAAGATGTTAACAAGACGTTGCAAGGAACCGCTTATGAGAGTTTTCTCCAAGCTGACTATTAA 1185 0.4186 GSFNAPNSSLDSPPFSHYSPRIFLSFCGIMVVEEMCFFNKDVLVIKAQKKSPLVLRMSVLVFSMVCGVFICCVCLKQISTQARAKLLELQTIQNPSSQSVLKITDHTFTTLTLSLLIGTPLCSKPCAFLCHIVKPRSGSGWFETLLNSHINVSSNGEIFSVRERRMNASTIVKTLDKVYSLDWVSSASKNECSAAVGLKWMLNQGLMEHPKEIADYFNHRSVSVIFLLRRNLLRRLVSTLANSYDRYAKLLNGTHKSHVHSTEEVSLSLSLSLSLSLSLSLSLSICIADTLLQYKPAINSTSLLTNLKVMETRVAKALEYFSATRHMILYYEDLIQNPTELKGVLDFLGLPQMELTSRQVKIHRGPLSDHIKNWEDVNKTLQGTAYESFLQADY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0010 394 Pfam Sulfotransferase domain 135 354 IPR000863 GO:0008146
Amo01g0010 394 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 32 266 - -
Amo01g0010 394 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 288 394 - -
Amo01g0010 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 391 IPR027417 -
Amo01g0010 394 Gene3D - 132 379 IPR027417 -
Amo01g0010 394 PANTHER SULFOTRANSFERASE 32 266 - -
Amo01g0010 394 PANTHER SULFOTRANSFERASE 288 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0010 Amo-Chr1 568590 572564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0010 - - gmx:100795357 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0010 01 568590 572564 Amo11g0729 11 14904209 14908419 hybridization
Amo01g0010 01 568590 572564 Amo05g1033 05 13633886 13636947 PCT