Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3879 ATGATTGAAGATACACTTCTTATTCACAAGGACTATGTGGACATAAAATCTATTAAGAAATCTCCATTAACATATGGGTTGGTAGTTTTGGTCATCACTGCAGTTTGTGGAATGTATCTTTGCTCAATTAATTTAGAGCATCCAAGGGTTATTATTAGAGCAAATACAAAGTTGTTGGAACTTAGAAGTAAAGTCTTTAATAGTAATAATAACCATTCATCATCTTGTTATCCTTATGGTGTGGAACAATGGGAACTTCCCTACTTGCATTATCCACAACCCAAAACTTATAACAGAGAGGAATGTGCATGTAATCCTGTTAGGTTTTTTGTGATCCTATCAATGCAAAGATCAGGAAGTGGATGGTTTGAGACATTTTTGAACAGCCATGGCAATGTAAGCTCCAATGGTGAGATATTCTCTTTGAAAAAAAGAAGAGAAAATGTTTCTTCAATTTTGAAGACAATGGACACACTTTACAATCTTGATTGGTTCACTAGTGCTTCCAAGAATCAATGCACTTCAGCTTTGGGATTCAAATGGATGCTCAATCAGGGTTTGATGGAGAATCATGAGGAGATAGTGAAATACTTTGAAAGGAGAAAGGTTTCAGTAATATTTCTTTTCAGAAGAAATTTGCTTCGCAGAATGGTATCTGTTTTAGCAAATTCATATGACAAAGATGCCAAGCCATTGAATGGAACCCACAAGTCTCATGTTCACTCTCCATTAGAGGCTAAAATTCTTGCCAAATACAAGCCATGGATCAACACCACGTTACTGGAATCAGAACTGAAGGAAACAGAAGAGACAGCTTCAAAAGCCATTGAATATTTTAACAACACTCACCACATTGTTCTCTATTATGAGGATCTTCTGAAAAATCTCACTAAACTGAATGATGTTCAAGAATTTCTAAGAATACCGCACAGAGATTTGCACAGTCGTCAAGTGAAGATACACACAGCTCCATTATCAGAACAAATTGGGAACTGGGAACAATTACAAGAAGCTCTCAAAGGGACTCAATACCAAGCTTTTCTATCATCAGACTGA 1056 0.3617 MIEDTLLIHKDYVDIKSIKKSPLTYGLVVLVITAVCGMYLCSINLEHPRVIIRANTKLLELRSKVFNSNNNHSSSCYPYGVEQWELPYLHYPQPKTYNREECACNPVRFFVILSMQRSGSGWFETFLNSHGNVSSNGEIFSLKKRRENVSSILKTMDTLYNLDWFTSASKNQCTSALGFKWMLNQGLMENHEEIVKYFERRKVSVIFLFRRNLLRRMVSVLANSYDKDAKPLNGTHKSHVHSPLEAKILAKYKPWINTTLLESELKETEETASKAIEYFNNTHHIVLYYEDLLKNLTKLNDVQEFLRIPHRDLHSRQVKIHTAPLSEQIGNWEQLQEALKGTQYQAFLSSD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3879 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 313 IPR027417 -
Amo16g3879 351 Gene3D - 108 338 IPR027417 -
Amo16g3879 351 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 9 351 - -
Amo16g3879 351 Pfam Sulfotransferase domain 111 310 IPR000863 GO:0008146
Amo16g3879 351 PANTHER SULFOTRANSFERASE 9 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3879 Amo-Chr16 150587505 150592162 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3879 - - aip:110262447 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3879 16 150587505 150592162 Amo11g0729 11 14904209 14908419 ECH
Amo16g3879 16 150587505 150592162 Amo16g3879 16 150587505 150592162 ECH