Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0328 ATGGTCTCTGCGAGAATTTTCGTGCTTAGAAAAAGTTTGCCATGCTCAGATGAGAAAATCAGCATTGGCATCAACAGCAGCGACCGAAAGGACACAGAATATAACGCCTTTCTCGCACCCTTCACATACCCAGCATCTAACGATACCTACCTAACCGACTCTTCTTCTAGAACCTTCCAGAACAACAGCAACCACGACGACGATCTTCTTGAGTTCGGGTTTACCAGGCCCGATTTCCCGCCGGGTCAACTCGCTGGCACCGTCGAGTTCTACCGTCGCCACGTGTTCCTCTGCTACAAGAGTCCCGCTGCGTGGCCGCCGCGGATTGAGGCCTGGGAATTTGACCGATTGCCGCGGTTGCTCCACGCCGCCGTCGTCTCCGGTAAAGGTCGCATGAAGAAGGAGACCCTCTTAACAATTTGCGAGGGACATGATGGGACCGAAACATCCAATGGTGATATGCTAATTTTTCCAGACATGGTCAGATACAGGCGATTAACACATTTTGATGTGGAAACATTCGTCGAAGAAGTTCTTGTCAACGATGGAGAATGGCGTCCTGGCAACCCCGAAGCCTTGTTGGCTTCATATGTGTTCGTGTGTTCACATGGATCCCGGGACCGGAGATGCGGAGCTTGTGGACCTGTCTTAGTTAGTAGGTTCAGGGAAGAGATAGAGTTACTTGGTCTTCAAGGTAAAGTGTTTGTTAGCCCATGCTCTCACATTGGGAGGCACAAGTGTGGAGGAAATGTCATTATATTCGGGTCAAGCATCAATGGAGAAGCCACTGGCCATTGGTATGGATATGTTACTCCGAAAGATGTACCTTTGTTGATTCAACAACATATAATTAAAGGAGAAATTTTGGACTCGTTATGGAGGGGCCAAATTGGTTTGACAGAAGAAGAACAAAAAAAGAGCCAAGAACAAAGGATTCGTCAGAACAGTGTAACAAATTTTAAAGAAAACACAGAAGAGTTCATGGATACAAACAATCATACAACAGGCACTGTTGCGTTTCAATTCCAAGAGAGCATTGCAACCTGTTGCCAAGATAATGGATATTCCTCTTGCCATCAGGACGATCATATGTCGTTAGAAAAGACGAAGATCGCTGGAGCCATTGAGACGGAGGCAAAGCTCTTAACTGATGATGATGAGTTCAGAGAGAATGTACCGTCTCGGGTAAGTAATGGCAAAGCAGCATCACGCAAATTTTGTTCCATTCCAACATGGCTTGACTACTGGGAGCAAGAAGATACTTATGCTGCTCTTTCTGTCGTATGCGCTGCCGTGTCGGTTGTTATTGCCTATCGCTGCTACAAGAACAGCTGA 1335 0.4682 MVSARIFVLRKSLPCSDEKISIGINSSDRKDTEYNAFLAPFTYPASNDTYLTDSSSRTFQNNSNHDDDLLEFGFTRPDFPPGQLAGTVEFYRRHVFLCYKSPAAWPPRIEAWEFDRLPRLLHAAVVSGKGRMKKETLLTICEGHDGTETSNGDMLIFPDMVRYRRLTHFDVETFVEEVLVNDGEWRPGNPEALLASYVFVCSHGSRDRRCGACGPVLVSRFREEIELLGLQGKVFVSPCSHIGRHKCGGNVIIFGSSINGEATGHWYGYVTPKDVPLLIQQHIIKGEILDSLWRGQIGLTEEEQKKSQEQRIRQNSVTNFKENTEEFMDTNNHTTGTVAFQFQESIATCCQDNGYSSCHQDDHMSLEKTKIAGAIETEAKLLTDDDEFRENVPSRVSNGKAASRKFCSIPTWLDYWEQEDTYAALSVVCAAVSVVIAYRCYKNS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0328 444 Pfam Sucrase/ferredoxin-like 84 295 IPR009737 -
Amo11g0328 444 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 62 443 IPR009737 -
Amo11g0328 444 PANTHER SUCRASE-LIKE PROTEIN 62 443 - -
Amo11g0328 444 SUPERFAMILY Thioredoxin-like 197 298 IPR036249 -
Amo11g0328 444 Gene3D Glutaredoxin 195 295 - -
Amo11g0328 444 CDD TRX_Fd_Sucrase 196 297 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0328 Amo-Chr11 5032521 5036706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0328 - - gmx:100780395 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0328 11 5032521 5036706 Amo11g0328 11 5032521 5036706 ECH
Amo11g0328 11 5032521 5036706 Amo01g0334 01 5335968 5339919 hybridization
Amo11g0328 11 5032521 5036706 Amo07g0234 07 2131775 2134559 PCT
Amo07g0234 07 2131775 2134559 Amo11g0328 11 5032521 5036706 PCT