Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0234 ATGATGTCCAGCAGCAATAGGGACAGAGAAGAAGCGCCACTTACATTCACGATCCCTTCATCTTCTTCCAATTCCTCACCAATCACCGTCTCCGACCAACTCGACAGCTACCTTGCAGACCCTAGGAGTGCTTCTGGAAGCTTCCAGAACGAGGGACTCCTCGGTGGCGGCGGTGGAGGAGGAGACCCTGCTGCCGAAGCCGAATTCGGCTTCACTCGCCCGGATTTTAGGCAGAGCCCTCTCGCCGGCACTGTCGAGCTTTATGAGCGCCACGTGTTCCTTTGCTACAAGAATCCTCGGGTTTGGCCACCGAGAATCGAGGCGGCAGAGTTTGATCGGTTGCCGAGGTTGCTCTATGCAGCTGTCATGGCTAGGAAGAACCACATGAAGAAGGAGACTCGCTTAACGATATGTGAGGGTCATGATGGGACTGAAACATCAAATGGTGATGTATTGATCTTTCCTGACATGATCAGATATAGGAGACTAACACATTTTGATGTTGAAACGTTTGTTGAAGAAGTTCTTGTGAAAGATGGAGAATGGCTTCCTGGAACCCCGGAAGCATTGAAAGGTTCATATGTTTTTGTGTGTTCGCATGGGTCCCGTGATCGTAGATGTGGGGTTTGCGGACCTGTCTTGGTCAGCAGATTCAGGGAAGAGATAGAGTTACATGGTCTTCAGGGTAAAGTGTTTGTAAGCCCATGCTCACATATTGGGGGTGATAAGTATGCCGGAAATGTTATTATATTTAATAGGTCGTGTGCATACGGAGAAGTCACCGGGCACTGGTATGGATATGTTACTCCAGATGATGTACCTTCATTACTTCAACAGCATATTGTGAAAGGAGAGATTATAGACTCCTTATGGAGGGGTCAGATGGGTTTATCAGAAGATGAACAAATCAAGAGCCAAGAACAAAGGTTTCTGCTTAATGGTTTGGGAAGTTTCGAAGAAGGCAATGCAATATACAGATCTCAAGACAACTCTGTGGGATGCTGCCAAACAAATGGAGTGAGCTGCTGCCAAGAAAACGGAGTCTCTTCCTCTTCTCCGAATCACGTGTTAGTTGAAAAGAGAAAAAACGCCGATGTCATTGAGACAGAGGCAAAACTCTCAGCCGATAACAAGAGTGGTGAGACCGTGATTTCTCGCATCAAAAGCGGCAAAGGAGCTTCACGCAAGTTTCATTCCATGACAACATGGCTTGAGAGTTGGGAGCGAGAAGATACTTATGCCGCCCTTGCCGTTGTTTGTGCCGCTGTATCAGTTGGTATTGCCTATAACTGCTACAAACAGTTGACATAA 1311 0.4729 MMSSSNRDREEAPLTFTIPSSSSNSSPITVSDQLDSYLADPRSASGSFQNEGLLGGGGGGGDPAAEAEFGFTRPDFRQSPLAGTVELYERHVFLCYKNPRVWPPRIEAAEFDRLPRLLYAAVMARKNHMKKETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALKGSYVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGGDKYAGNVIIFNRSCAYGEVTGHWYGYVTPDDVPSLLQQHIVKGEIIDSLWRGQMGLSEDEQIKSQEQRFLLNGLGSFEEGNAIYRSQDNSVGCCQTNGVSCCQENGVSSSSPNHVLVEKRKNADVIETEAKLSADNKSGETVISRIKSGKGASRKFHSMTTWLESWEREDTYAALAVVCAAVSVGIAYNCYKQLT* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0234 436 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 66 435 IPR009737 -
Amo07g0234 436 MobiDBLite consensus disorder prediction 1 43 - -
Amo07g0234 436 SUPERFAMILY Thioredoxin-like 194 297 IPR036249 -
Amo07g0234 436 Pfam Sucrase/ferredoxin-like 81 293 IPR009737 -
Amo07g0234 436 PANTHER SUCRASE-LIKE PROTEIN 66 435 - -
Amo07g0234 436 CDD TRX_Fd_Sucrase 192 295 IPR009737 -
Amo07g0234 436 Gene3D Glutaredoxin 192 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0234 Amo-Chr7 2131775 2134559 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0234 - - gmx:100816329 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0328 11 5032521 5036706 Amo07g0234 07 2131775 2134559 PCT
Amo01g0334 01 5335968 5339919 Amo07g0234 07 2131775 2134559 PCT
Amo07g0234 07 2131775 2134559 Amo11g0328 11 5032521 5036706 PCT
Amo07g0234 07 2131775 2134559 Amo01g0334 01 5335968 5339919 PCT