Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1074 ATGTTCTGTTCTGTGTCCACATCTGTTGCAACTTGTTGTGTGTACTGTCAACTGTGTGTACTGTACCAATATCAAGAGGCACAGTTATTGAGCAAAGTCATGGGAAGGTTGTTTGTGATCAATCTTGAAGGGAAGATCTATAGCTGCAAACACTGCCGCACCCACCTTGCCATATCTGAAGACATCATCTCCAAGGCCTTCCATTCCAGACATGGGAAAGCTTATCTTTTCAACAAGGTTGTGAATGTTTCTGTTGGAGAAAAAGAGGAGAGGACGATGATAACTGGATTGCATACTGTGGCTGACATATTCTGTGTTGGTTGCGGATCAATCCTTGGTTGGAAATATGAGATTGCTCATGAGAAAAACCAGAAGTACAAGGAAGGAAAATCGGTGCTCGAGCGGTACAAGATTTCAGGTCCTGATGGAAGCAATTATTGGATTACTCATGAAGCTCATGCTGGTGGAAGTGACGCTGATGATGCTTAA 489 0.4315 MFCSVSTSVATCCVYCQLCVLYQYQEAQLLSKVMGRLFVINLEGKIYSCKHCRTHLAISEDIISKAFHSRHGKAYLFNKVVNVSVGEKEERTMITGLHTVADIFCVGCGSILGWKYEIAHEKNQKYKEGKSVLERYKISGPDGSNYWITHEAHAGGSDADDA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1074 162 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 34 162 IPR039058 -
Amo10g1074 162 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 46 139 IPR004910 -
Amo10g1074 162 ProSiteProfiles Yippee domain profile. 45 142 IPR034751 -
Amo10g1074 162 PANTHER PROTEIN YIPPEE-LIKE 34 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1074 Amo-Chr10 21410644 21413634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1074 - - adu:107469509 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1074 10 21410644 21413634 Amo17g0297 17 4835034 4838486 PCT
Amo10g1074 10 21410644 21413634 Amo07g0499 07 5612802 5616236 PCT
Amo17g0297 17 4835034 4838486 Amo10g1074 10 21410644 21413634 PCT
Amo07g0499 07 5612802 5616236 Amo10g1074 10 21410644 21413634 PCT