Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0499 ATGGGGAGGATGTTTGTGACACATCTTGAAGGGAAGTTCTATAGTTGTAAACACTGCCGCACCCATCTCGCTCTTTGTCAAGACATCGTCTCCAAGTCTTTCCACTGCAGACATGGGAAAGCTTATCTCTTCAGTAAGGTCGTGAACGTTTCTCTTGGTAAAAACGAGGAGAGACAGATGATGACTGGGTGGCATACTGTGGCAGACATTTTCTGTGTTGGTTGTGGATCGATTGTGGGTTGGAAATATGAAACTGCCCATGAAAAAACCCAGAAGTACAAGGAAGGAAAATCTGTCCTTGAACGGTACAAGGTTTCAGGTCCTGATGGCAGCAATTATTGGGTCAGCCATGAGGCACATGTTGGTGGGAGTGATGTAGATGATGCTTAG 390 0.4564 MGRMFVTHLEGKFYSCKHCRTHLALCQDIVSKSFHCRHGKAYLFSKVVNVSLGKNEERQMMTGWHTVADIFCVGCGSIVGWKYETAHEKTQKYKEGKSVLERYKVSGPDGSNYWVSHEAHVGGSDVDDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0499 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Amo07g0499 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Amo07g0499 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 106 IPR004910 -
Amo07g0499 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0499 Amo-Chr7 5612802 5616236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0499 - - cit:102609322 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0297 17 4835034 4838486 Amo07g0499 07 5612802 5616236 hybridization
Amo10g1074 10 21410644 21413634 Amo07g0499 07 5612802 5616236 PCT
Amo07g0499 07 5612802 5616236 Amo10g1074 10 21410644 21413634 PCT