Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0744 ATGGCATTATTCTCATTCTCCTCACTCTGCCTCACAATTTTTGTCATCTATTCTTCTTTATCTCTATCTGCTGAATCACGTGTCTCACCAATTGCACCAATCTCTTCTCTTATTAGCAAAACCCTTTTCGACTCAATTTTTTTACATAAAGATGACAATGCTTGCCCTGCTAGAAACTTTTACACTTATGAATCCTTCGTTGAGGCAACCTCGAGCTTCCCCGCGTTCGGCTCGACCGGATGCTCGGCCACACGGAAGCGCGAGGTTGCCGCATTTCTTGCACAGATCTCACATGAAACCACAGGTGGTTGGGCTACTGCACCTGATGGACCATATGCTTGGGGGCTGTGCTTCAAGGAAGAAGTTAGTCCTCAAAGTGATTATTGTGATTCCTCCAACAAAGAATGGCCCTGTTATCCTGGAAAGAGTTACAACGGCAGAGGACCAATTCAACTTTCCTGGAATTACAACTATGGGCCAGCAGGGAAGGCCTTGGGATTCGATGGTCTTAAGAACCCAGACATTGTGTCAAACAATTCAGTAATTGCATTCAAAACAGCACTCTGGTTTTGGATGACAGAGCAGAAACCAAAACCTTCTTGCCACAACGTCATGGTTGGGAATTACGTGCCAACAGCATCTGATAGAGCAGCAAATAGAACCTTAGGGTTTGGGTTGGTTACTAACATAATCAATGGTGGACTTGAATGTGGAGTTCCAGATGATGCAAGAGTCAATGATCGGATTGGGTACTTTCAAAGATATGCTAAGTTGTTTAATGTAGATACTGGACCTAACTTGGATTGTGCATATCAGAAATCCTTCTAA 828 0.4372 MALFSFSSLCLTIFVIYSSLSLSAESRVSPIAPISSLISKTLFDSIFLHKDDNACPARNFYTYESFVEATSSFPAFGSTGCSATRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSSNKEWPCYPGKSYNGRGPIQLSWNYNYGPAGKALGFDGLKNPDIVSNNSVIAFKTALWFWMTEQKPKPSCHNVMVGNYVPTASDRAANRTLGFGLVTNIINGGLECGVPDDARVNDRIGYFQRYAKLFNVDTGPNLDCAYQKSF* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0744 275 Gene3D - 41 275 - -
Amo09g0744 275 Pfam Chitinase class I 37 269 IPR000726 GO:0004568|GO:0006032|GO:0016998
Amo09g0744 275 PANTHER OS05G0138200 PROTEIN 10 275 - -
Amo09g0744 275 Gene3D Endochitinase, domain 2 120 178 - -
Amo09g0744 275 PANTHER CHITINASE-RELATED 10 275 - -
Amo09g0744 275 CDD chitinase_GH19 38 269 - -
Amo09g0744 275 ProSitePatterns Chitinases family 19 signature 2. 182 192 IPR000726 GO:0004568|GO:0006032|GO:0016998
Amo09g0744 275 ProSitePatterns Chitinases family 19 signature 1. 55 77 IPR000726 GO:0004568|GO:0006032|GO:0016998
Amo09g0744 275 PIRSF Endochitinase 7 275 IPR016283 GO:0004568|GO:0005975
Amo09g0744 275 SUPERFAMILY Lysozyme-like 34 275 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0744 Amo-Chr9 12325563 12327398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0744 13 275 Glycoside Hydrolase AT4G01700 74.717 7.83e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0744 - - gmx:100785397 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0970 16 15673143 15674734 Amo09g0744 09 12325563 12327398 PCT
Amo06g0067 06 712018 713576 Amo09g0744 09 12325563 12327398 PCT
Amo09g0744 09 12325563 12327398 Amo16g0970 16 15673143 15674734 PCT
Amo09g0744 09 12325563 12327398 Amo06g0067 06 712018 713576 PCT