Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2437 ATGGCAAGTCAAAGTGGTGCGTCTCGAAGGAGCATAACGTCTGTTAGAAAATCCATTGATCATGGAGCTTCTCAATCTAATGCTCGAAAGGGACTGACGGCAGAGCGGACAGTAAAATCATTGCGTCTTTCAAAGGCTCTAACAGTACCTGAAACAACAACCATCTATGAAGCTTGTCGTCGCATGGCTGCTCGCAGATTAGATGCTATATTACTCACTGATTCAAATGCTTTGCTCTGTGGYATCCTTACAGACAAGGACATAYCAAAAAGAGCTATTGCCTCAGAGCTTAGTCTTGAAGACACACCTGTTTCTAAGATTATGACAAAGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCAGTGGAAGCCCTCCAAAAGATGGTGCAAGGCAAATTCAGACATTTACCTGTGGTGGACAATGGAGAAGTTGTTGCCATACTTGATATAGCAAAGTGCTTGTATGATGCTATRGCTCGTATGGAACGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAGGGTGTTGAAAAACAATGGGGATCATCTACTGCGGTCAATTCAACATTCATTGAGACTATTCGGGAACAGATATTCAAGCCATCATTGTCTACGATCATTCCTGAGAATTTAAAGGTTGTAACAGTTTCACCAACAGATTCTGTTTTGACAACTACGAAGAAGATGGTTGAACTTCATTCAAGTTCTGCTGTTGTGACAGTTGATGGCAAACCTCGCGGCATCCTTACTTCCAAGGATATATTGATGCGGGTAGTTGCGCAAAATCTTCCTCCAGTTTCAACTCCTGTTGACAAGGTGATGACTCCTAATCCAGAATGTGCAGTTATTGATACACCAATAGTAGATGCACTTCACACTATGCATGATGGGAAATTTTTGCATCTTCCTGTGGTTGATAGAGATGGTGGGGTAGTTGCGGTGGTTGATGTGATTCATGTCACGCATGCTGCTGTTGCAACAGCAAGTCAGGTTGGAAACAATGAAGCTGCCAGCACCATGATGCAAAGATTCTGGGATTCGGCCATGGCCTTYACTCAAAATGATGATGATGACGAAACACGAAGTGACAGTTCCTTGAAATTTGCTTCAGAAGGAGGGGAAACTGGGAGATCCCTCACTTATCTTGCAGCAGGAATGCCAAATATATTTTCATTCAAAATACAAGATAGGAAGGGCAGAATGCATAGATTCACATGTGATACACGGAGCATGACAGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGACCCCAATAATCTACCCCAAATTRTGGTACTCTTCTGTATTATATATTCATTCATAAGATTGAGTTGA 1353 0.4198 MASQSGASRRSITSVRKSIDHGASQSNARKGLTAERTVKSLRLSKALTVPETTTIYEACRRMAARRLDAILLTDSNALLCGILTDKDIXKRAIASELSLEDTPVSKIMTKNPVFVLSETLAVEALQKMVQGKFRHLPVVDNGEVVAILDIAKCLYDAXARMERAAEKGKAIAAAVEGVEKQWGSSTAVNSTFIETIREQIFKPSLSTIIPENLKVVTVSPTDSVLTTTKKMVELHSSSAVVTVDGKPRGILTSKDILMRVVAQNLPPVSTPVDKVMTPNPECAVIDTPIVDALHTMHDGKFLHLPVVDRDGGVVAVVDVIHVTHAAVATASQVGNNEAASTMMQRFWDSAMAFTQNDDDDETRSDSSLKFASEGGETGRSLTYLAAGMPNIFSFKIQDRKGRMHRFTCDTRSMTEVITSILQRLGDDIDPNNLPQIXVLFCIIYSFIRLS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2437 450 Gene3D - 189 340 IPR046342 -
Amo08g2437 450 Gene3D - 15 173 IPR046342 -
Amo08g2437 450 MobiDBLite consensus disorder prediction 354 373 - -
Amo08g2437 450 CDD CBS_pair_MUG70_1 43 157 - -
Amo08g2437 450 SMART cbs_1 214 261 IPR000644 -
Amo08g2437 450 SMART cbs_1 111 155 IPR000644 -
Amo08g2437 450 SMART cbs_1 45 93 IPR000644 -
Amo08g2437 450 SMART cbs_1 279 324 IPR000644 -
Amo08g2437 450 ProSiteProfiles CBS domain profile. 42 99 IPR000644 -
Amo08g2437 450 Pfam CBS domain 273 322 IPR000644 -
Amo08g2437 450 Pfam CBS domain 44 90 IPR000644 -
Amo08g2437 450 Pfam CBS domain 104 148 IPR000644 -
Amo08g2437 450 Pfam CBS domain 214 259 IPR000644 -
Amo08g2437 450 SUPERFAMILY CBS-domain pair 37 151 IPR046342 -
Amo08g2437 450 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 13 432 - -
Amo08g2437 450 ProSiteProfiles CBS domain profile. 208 268 IPR000644 -
Amo08g2437 450 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 13 432 - -
Amo08g2437 450 ProSiteProfiles CBS domain profile. 276 333 IPR000644 -
Amo08g2437 450 MobiDBLite consensus disorder prediction 1 31 - -
Amo08g2437 450 ProSiteProfiles CBS domain profile. 108 166 IPR000644 -
Amo08g2437 450 SUPERFAMILY CBS-domain pair 214 326 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2437 Amo-Chr8 38118992 38123712 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2437 - - gmx:100785816 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2437 08 38118992 38123712 Amo13g3547 13 120184751 120189075 PCT
Amo08g2437 08 38118992 38123712 Amo03g2533 03 110463374 110467008 PCT