Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1434 TCTCTCTCTCTCGTTCTCTCTCCCAAACACACTCTATCAGCAAAGAATACACAGAGAAAAAGAAGAAAGAATCAGACAACACAAGAAAAAATATCTGAAATGCCAACGACACCGTTCTCGGACTCCGACGAGCTCCGTATGCCGCTGGTGGCGGTGGCAGCAAAGGAGGCGGAGACGGAGAAGCTTTGCATCGACGAGATGCTTCGAAAGTATTGCGGCGAGTTCGGAAAGTGGCAGTTGAGACACTTCATCTTCACAAGCCTCGCGTGGGCGCTGGAGGCCTTCCACACCATGGTCATGATCTTCGCCGACCGTGAGCCGGAGTGGCGATGTACCGCCACCACCTCCGCTGCCTGCGGAGTGGTTGGGAGCACCTGCGAAATCCGGCCGGATGACTGGGAGTGGATTGGTGGACGCGGCGGCGCCACCGTGTCAGAGTGGGGACTTGTTTGCGGCGACAAATTTAAAGTTGGGCTCGTCCAGTCCTTATTCTTTGCCGGATGTATGATTGGTGCTGGAATATTTGGTCACCTCTCAGACTCTTTTCTTGGAAGGAAAGGTTCATTGATGGTCGTTTGTGCTTTAAACGCCATTTTTGGTTGCCTCACAGCATTTTCGCCAAACTATTGGATCTACGTCATTTTCCGCCTCCTCACTGGTTTCAGTACTGGCGGCGTTGGCCTATGCGCATTCGTCCTTGCCACCGAGCCAATCGGCCCAGCAAAACGTGGCATCGCCGGAATGTCTACCTTCTACTTCTTCTCCATCGGCATTGCAATCCTCTCTGCCGTTGCTTACGTCTTCCAAACATGGCGCGCGCTTTACATTGCGTCCTCCATCCCTTCCATTCTTTTCGTCTTCCTCGTCATCCCTTTCCTCTCAGAGTCACCAAGATGGTACCTCGTTCGTGGAAGAGTAACTGAAGCCATGAAGATCATGTCTATCATTGCTTCTACCAATGGGAAGCACCTCCCTAGTGGTGTTCTTCTTGCACTTGACGAAGAAGTCGAAGTAGAAGCAGAAGCAAAAACAGAAGCACTAACCTTGACTTATAAGAACAACAACAATAAGTCTTTGAAAAACAAAAATGCAGTTGGTGGTTCTATCGTTGACGTGCTTCGCTCCCCAGTCACTAGAATAAGGTTGATTCTAATGGTGGCAATCAACTTCTTTTGCTCTGTTGTTTACTATGGTCTGAGTTTGAACGTGGTAAATCTTGATACCAACCTTTACATGAACGTGGCGTTGAATGCGGTGGCAGAGATGCCGGCGTTTGGGATAACGGCGATTTTGTTGGACAAGTTTGGGAGGAAGCCATTGGCAATAGGGACAATGTGGTTCAGCGGATTATTTTGTTTGTTAGGTAGTTTAATGGGTAATGTTGGAGTGTGGAAGTTAGTTAGAATGGTGTGTGGTATTTTGGGAATATTTGGGATGGCCGGAACTTATAATTTGTTGTTTATTTACGCGGCGGAGTTGTTTCCTACAGTGGTCAGGAACGCGGCACTTGGGTGCGCCACGCAAGCGGTGCAAATGGGGGCGATATTGTCGCCGGTGGTGGTGGTTTTGGGTGGCTGGTTGCCGTTCGCAGTGTTTGCTGTATGTGGAATAGTGGGTGGCATGTTTGCATTTTATTTGCCGGAAACTTTGAATCAGCCTTTGTATGATACATTCTCTGGGTTGGAAGCTGGGCTTGTTTGA 1701 0.4915 SLSLVLSPKHTLSAKNTQRKRRKNQTTQEKISEMPTTPFSDSDELRMPLVAVAAKEAETEKLCIDEMLRKYCGEFGKWQLRHFIFTSLAWALEAFHTMVMIFADREPEWRCTATTSAACGVVGSTCEIRPDDWEWIGGRGGATVSEWGLVCGDKFKVGLVQSLFFAGCMIGAGIFGHLSDSFLGRKGSLMVVCALNAIFGCLTAFSPNYWIYVIFRLLTGFSTGGVGLCAFVLATEPIGPAKRGIAGMSTFYFFSIGIAILSAVAYVFQTWRALYIASSIPSILFVFLVIPFLSESPRWYLVRGRVTEAMKIMSIIASTNGKHLPSGVLLALDEEVEVEAEAKTEALTLTYKNNNNKSLKNKNAVGGSIVDVLRSPVTRIRLILMVAINFFCSVVYYGLSLNVVNLDTNLYMNVALNAVAEMPAFGITAILLDKFGRKPLAIGTMWFSGLFCLLGSLMGNVGVWKLVRMVCGILGIFGMAGTYNLLFIYAAELFPTVVRNAALGCATQAVQMGAILSPVVVVLGGWLPFAVFAVCGIVGGMFAFYLPETLNQPLYDTFSGLEAGLV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1434 566 Pfam Sugar (and other) transporter 153 555 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo08g1434 566 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 64 563 - -
Amo08g1434 566 ProSitePatterns Sugar transport proteins signature 2. 218 243 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo08g1434 566 Gene3D MFS general substrate transporter like domains 79 558 IPR036259 -
Amo08g1434 566 MobiDBLite consensus disorder prediction 14 41 - -
Amo08g1434 566 ProSiteProfiles Major facilitator superfamily (MFS) profile. 82 551 IPR020846 GO:0022857
Amo08g1434 566 SUPERFAMILY MFS general substrate transporter 153 554 IPR036259 -
Amo08g1434 566 ProSitePatterns Sugar transport proteins signature 1. 428 444 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo08g1434 566 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 64 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1434 Amo-Chr8 23338992 23343646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1434 34 562 Organic Solute Cotransporters AT3G20660 67.481 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1434 K08202 - gmx:100797665 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1281 18 22826246 22831035 Amo08g1434 08 23338992 23343646 hybridization
Amo08g1434 08 23338992 23343646 Amo03g0304 03 5755475 5759267 PCT
Amo03g0304 03 5755475 5759267 Amo08g1434 08 23338992 23343646 PCT