Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0304 ATGGCAGCAACGACGTCTTCTCATGATGAAATAAAAAAGGCTGCACCGGAGCCGGAGCTCCAATCTCCTCTAATACCTTCCAGTGTCGCGGCCAACGGAGGCATGAAACCGCCAGAGAAGCTCTGCTTCGACGAGATGCTTCAGATGTATTGCGGCGAGTTCGGAAGGTGGCAGATGAGGCACTTTGTCTTCACAACCTTCGCGTGGGCGCTCGAGGCCTTCCACACGATGGTCATTATCTTTGCAGATCGTGAGCCGGAATGGAGGTGCGTTCCCGGTTCCAAATGCGATCCGGCCGCAAGTACCGTGTGCGACTTGGAACCGGGAACATGGGAGTGGGTCGGAGGACCGCGTATGTCGACGGTGTCGGAGTGGGGCTTGATTTGTGGCAACAAATATAAGGTTGGACTGGTTCAGGCCGTGTTCTTTGGCGGCTGCATGATCGGAGCTGGAATATTTGGCCACCTCTCAGATTCAAATCTTGGAAGGAAAGGTTCCCTCACTATGGTTTGCATCCTAAACACCATCACCGGAATGCTAACATCACTCGCTCCTAACTACCTCTCCTACGTCACCCTCCGCTTCCTCACCGGCTTCAGCACTGGCGGCGTAGGCCTTTGCGCCTTTGTCCTCGCCACCGAACCGATAGGGCCCACAATGCGCGGCGTGGCCGGCATGTCCACATTCTACTTTTTCTCCTCCGGCATCGCCCTCCTCGCCGGCATCGCCTACCTCTTCCCAGAATGGCGCCAACTCTACATCGCCTCCACCCTGCCATCTCTTCTCTACATCCTCTTTGTTCTTCCCTTCGTCTCCGAGTCACCAAGATGGTACCTCGTGAAGGGAAGAATCAAAGCGGCCATGGCGATCATGTCCGCCATTGCGACCACCAACGGCAACCACCTCCCGCCAGGTGTTATTCTGGCCCTCGACGAGGACTTGTGTTCGCCGGCGGTGACACCGGCTATAAAGAACAAAGAAGAAGTATCGGGTTGTGTAGTGGACATTATTCGCTCGCGAGTAACGCGCACGCGCTTGTTCCTTTCAGTGGCTATAAACTTCATGTGTTCCGTGGTGTACTACGGCCTCAGCCTCAACGTAGTGAACCTTGGAACCAACCTTTACCTTAACGTTATATTGAACTCTATATCTGAGATGCCAGCTTTCATGTTAACAACTTTGTTTTTGGATAAGTTAGGGAGGAAGCCATTGACCATATTAACCCTGTGGTTTAGTGGGTTCTTTTGCTTTCTAGGGTCCCTAATAGGAAACAAAGGGGCATGGAAAGGTGTTAGAATGGTGTGTAGTATTTTAGGTATATTTGGAATGGCAGGGACTTATAACTTGTTGTTTATTTATACGGCGGAACTGTTCCCCACTGTGGTGAGGAACGTGGCGCTTGGGTGCACCACTCAAGCATCGCAGATGGGCGCCATTTTGGCACCGGTCGTCGTGATTTTGGGAGACTGGTGGCCATTTGTGGTGTTCACAGTTTGTGGGATGAGTGGAGGAATGTTTGCGTTTTACTTGCCAGAGACTCTGAACCAACCGCTCTATGATACGTTAACTGGAATGGAGGCTGCTGAGAATGAATCTGATGCCACAACAAGTGTCTGA 1617 0.5207 MAATTSSHDEIKKAAPEPELQSPLIPSSVAANGGMKPPEKLCFDEMLQMYCGEFGRWQMRHFVFTTFAWALEAFHTMVIIFADREPEWRCVPGSKCDPAASTVCDLEPGTWEWVGGPRMSTVSEWGLICGNKYKVGLVQAVFFGGCMIGAGIFGHLSDSNLGRKGSLTMVCILNTITGMLTSLAPNYLSYVTLRFLTGFSTGGVGLCAFVLATEPIGPTMRGVAGMSTFYFFSSGIALLAGIAYLFPEWRQLYIASTLPSLLYILFVLPFVSESPRWYLVKGRIKAAMAIMSAIATTNGNHLPPGVILALDEDLCSPAVTPAIKNKEEVSGCVVDIIRSRVTRTRLFLSVAINFMCSVVYYGLSLNVVNLGTNLYLNVILNSISEMPAFMLTTLFLDKLGRKPLTILTLWFSGFFCFLGSLIGNKGAWKGVRMVCSILGIFGMAGTYNLLFIYTAELFPTVVRNVALGCTTQASQMGAILAPVVVILGDWWPFVVFTVCGMSGGMFAFYLPETLNQPLYDTLTGMEAAENESDATTSV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0304 538 Pfam Sugar (and other) transporter 133 519 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo03g0304 538 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 44 530 - -
Amo03g0304 538 ProSitePatterns Sugar transport proteins signature 2. 196 221 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo03g0304 538 SUPERFAMILY MFS general substrate transporter 131 518 IPR036259 -
Amo03g0304 538 MobiDBLite consensus disorder prediction 1 32 - -
Amo03g0304 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 44 530 - -
Amo03g0304 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 61 515 IPR020846 GO:0022857
Amo03g0304 538 Gene3D MFS general substrate transporter like domains 114 521 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0304 Amo-Chr3 5755475 5759267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0304 6 533 Organic Solute Cotransporters AT3G20660 64.972 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0304 K08202 - qsu:112025516 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1281 18 22826246 22831035 Amo03g0304 03 5755475 5759267 PCT
Amo08g1434 08 23338992 23343646 Amo03g0304 03 5755475 5759267 PCT
Amo03g0304 03 5755475 5759267 Amo18g1281 18 22826246 22831035 PCT
Amo03g0304 03 5755475 5759267 Amo08g1434 08 23338992 23343646 PCT