Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1032 ATGGAAACCAATCAGCTACCTTGCAAGTCAAGCTTCTCTCTGCTCTTATTTTTCCTACTTACTATCATTGCTTTCCATGCTACAAATGCAGAGCATCAATACCATGAATTTGTTATCCAAAGAACACCAGTGAAGAGGCTGTGCAAGACACAAAGCATACTCACTGTAAATGGACAGTTTCCAGGCCCAGCAATTGAAGTAAAAGATGGTGATTCACTTGCAATCAAAGTAGTCAATGCTGGACCTTATAATATCTCTATCCACTGGCATGGATTGAGGATGCTGAGAAATCCATGGGCAGATGGACCAAGCTATGTGACTCAATGTCCTATCCAACCTGGGGGAAGTTACACATACCGTTTTACAATACAAAACCAAGAGGGAACCCTATGGTGGCATGCTCACACTGGCTTCCTACGAGCCACTGTTTATGGTGCTTTCATTATCCACCCGAAACAGGGTTCTTCCTATCCATTCACTCAGCCAAAGAGAGAATTTCCCATCCTCCTTGGGGAATGGTTTGATAGGGATCCTATGGCTCTCTTAAGGCAGACACAGTTAACAGGAGCTGCTCCAAATGTGTCTGTTGCTTACACCATCAACGGTCAACCCGGAGATCTCTACAGATGTTCTAGTCAAGAAACCGTGCGTGTTCCGGTAGATGTAGGCGAGACGATTCTGCTAAGAATCATCAACAGTGCCCTGAACCAAGAACTCTTCTTCTCAATAGCCAATCACAGAATGACAGTTGTCGGCACAGACGCGGCATACACGAAGCCTTTCAACACCGGAGTCATCATGATAGGACCCGGCCAGACAATCAACGTCCTCGTCACGGCCAACCAGCCTCCCGGCCGCTACTACATGGCGGCGCGTGCATACCAAACAGCCATGAACGCCGCCTTCGACAACACTACCACCACCGCCATCCTCGAATACAAATCCGCCAGCTGTAGCAGAAAAGGACCAGCACCGCGGCCAATTCTTCCCGCATTGCCGGCTTTCAACGACACGGCCACCGCCACCGCATACACGTCAGGAATCAGAGGAATGTCAAAGATTAACGTCTTCACAGACGCTGCTGATGCGAATTTGTTCTTCACAGTTGGATTAGGCCTAATTAATTGTACAAATCCTAATAGTCCCCGGTGCCAGGGACCAAACGGAACGCGATTCACGGCAAGCATTAACAATAATTCTTTTGTTCTTCCAAGGACAACCTCCTTAATGCAGGCTTACTACCAAGGAATACCCGGCGTGTTCACGACGGATTTTCCTCCGGTGCCGCCGCTGCAATTCAATTACTCCGGCAACGTTCCGCGGGGCCTGTGGACGCCTACGCCGGGAACTAGGCTCCTGAAGTTGAAGTATGGGACACGGGTGCAACTTGTGTTCCAAGATACAAATATTGTTACTACAGAGGACCACCCCATGCACATCCATGGCTTCCATTTCTTTGTGGTTGGATCTGGTTTTGGAAACTTTAACCCTTCGACGGATCCTGCAAGGTTTAACCTGGTTGATCCGCCCGTCAAGAACACCATTGGAACGCCTCCTGGAGGATGGGTGGCCATTCGATTCGTCGCCGATAATCCAGGAATTTGGTTCTTACACTGTCACATAGACTCACATCTGAATTGGGGACTGGCAACTGCACTTTTGGTAGAGAATGGAGTTGGCCCATCACAATCAGTGATTCCACCACCACCTGATCTCCCTCAATGTTAA 1728 0.4867 METNQLPCKSSFSLLLFFLLTIIAFHATNAEHQYHEFVIQRTPVKRLCKTQSILTVNGQFPGPAIEVKDGDSLAIKVVNAGPYNISIHWHGLRMLRNPWADGPSYVTQCPIQPGGSYTYRFTIQNQEGTLWWHAHTGFLRATVYGAFIIHPKQGSSYPFTQPKREFPILLGEWFDRDPMALLRQTQLTGAAPNVSVAYTINGQPGDLYRCSSQETVRVPVDVGETILLRIINSALNQELFFSIANHRMTVVGTDAAYTKPFNTGVIMIGPGQTINVLVTANQPPGRYYMAARAYQTAMNAAFDNTTTTAILEYKSASCSRKGPAPRPILPALPAFNDTATATAYTSGIRGMSKINVFTDAADANLFFTVGLGLINCTNPNSPRCQGPNGTRFTASINNNSFVLPRTTSLMQAYYQGIPGVFTTDFPPVPPLQFNYSGNVPRGLWTPTPGTRLLKLKYGTRVQLVFQDTNIVTTEDHPMHIHGFHFFVVGSGFGNFNPSTDPARFNLVDPPVKNTIGTPPGGWVAIRFVADNPGIWFLHCHIDSHLNWGLATALLVENGVGPSQSVIPPPPDLPQC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1032 575 CDD CuRO_2_LCC_plant 166 313 IPR034285 -
Amo07g1032 575 CDD CuRO_1_LCC_plant 35 151 IPR034288 GO:0005507
Amo07g1032 575 CDD CuRO_3_LCC_plant 420 558 IPR034289 GO:0005507
Amo07g1032 575 TIGRFAM laccase: laccase 31 575 IPR017761 GO:0046274|GO:0048046|GO:0052716
Amo07g1032 575 Pfam Multicopper oxidase 165 315 IPR001117 -
Amo07g1032 575 Gene3D - 33 163 IPR008972 -
Amo07g1032 575 PANTHER MULTI-COPPER OXIDASE 9 575 IPR045087 -
Amo07g1032 575 Pfam Multicopper oxidase 425 557 IPR011706 GO:0005507|GO:0016491
Amo07g1032 575 SUPERFAMILY Cupredoxins 34 178 IPR008972 -
Amo07g1032 575 SUPERFAMILY Cupredoxins 159 351 IPR008972 -
Amo07g1032 575 ProSitePatterns Multicopper oxidases signature 2. 538 549 IPR002355 GO:0005507
Amo07g1032 575 Gene3D - 382 575 IPR008972 -
Amo07g1032 575 PANTHER LACCASE-13 9 575 - -
Amo07g1032 575 Gene3D - 164 353 IPR008972 -
Amo07g1032 575 ProSitePatterns Multicopper oxidases signature 1. 533 553 IPR033138 -
Amo07g1032 575 SUPERFAMILY Cupredoxins 362 575 IPR008972 -
Amo07g1032 575 Pfam Multicopper oxidase 39 153 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1032 Amo-Chr7 19207942 19212073 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1032 K05909 - gmx:100786719 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0818 17 19364733 19368797 Amo07g1032 07 19207942 19212073 hybridization
Amo01g0546 01 8048633 8051108 Amo07g1032 07 19207942 19212073 PCT
Amo07g1032 07 19207942 19212073 Amo01g0546 01 8048633 8051108 PCT