Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0507 ATGTCATCTAAACAGACGTACAGCGTGTGCTTCTGCTGCCGGCGGCGCTTCAAGCTTGCGGCGGCGGAGGCACCGCCGGAGATCAAGTCTATGTTCGGAAAATACTCAGACGACAACGAGCTCATGACAGCTTCGCACCTTCAAAAGTTCATGGTTGAGGTTCAGTGCCAACAAAACGCCACTGAAGAGGAAGCTCAAGCCATCATCGATAGCCTCAAGCATTTCCACCGAAAGGGTCTCAATCTCGATGCTTTCTTCAAATATCTCTTCAGTGACTCCAACCTTCCCTTGCTTCCTTCTCTTGGAGTTCACCATGACATGAATTTACCCTTGTCCCATTATTTCATATATACCGGACATAATTCCTATCTAACTGGGAATCAACTTAGCAGTGACTGCAGTGATATCCCCATCATAAAGGCACTGGAGAGAGGTGTAAGGGTCATTGAATTAGACATTTGGCCTAATGCATCGAAGGATAATATCGATGTTCTTCACGGAAGGACATTGACTACTCCGGTTGAGCTTATCAGATGTTTGAATTCTATCAAAGAACATGCCTTTGTTGCATCAGAGTATCCAGTTGTAATAACATTGGAAGACCACCTTACTCCGGATCTTCAGGCTAAAGTAGCCGAGATGGTAGCTCAAACATTTGGGGAAATACTATTTTCTCCTGGATCAGAAGCCTTGAAGGAATTCCCTTCTCCTGAATCACTTAAAAGGAGGATCATTATATCAACCAAACCGCCTAAAGAGTACCTTGAGGCAAAGGACAAAGTCGATGATCCACCGCAGGAAAAAGCTTCAGGGGACAATCCAAAGCAGCGAAAGGTTTCAGGCGATGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAAAGGTGGAACTATTGCTGATTACAAGGACAATGAGGATGAAGAAAATTTCGATGGCGAGGAAGATCTCGAAGAAGGTGATAAGTCATCACACCACAACGAAGCTTCAGAATATAGACGTTTAATTGCCATTCATGCTGGGAAGCCGAAAGGTGGCATAACTGAGTGCCTCAAAGTGGATCCTGAAAAAGTGACACGTCTAAGTTTAAGTGAGCAACAACTTGAAAAGGCTGCTATGACTTATGGAAAAGAAATTGTCAGGTTTACGCAGCGGAATATATTAAGGGTGTATCCAAAAGGTACTCGCATCGATTCATCAAATTATAACCCATTAATTGGATGGATGCATGGGGCTCAAATGGTTGCATTTAACATGCAGGGATACGGTAGATCTCTTTGGTTGATGTACGGAATGTTCAAAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTGTTAAAGAATGGTCCAAATGGTGAGATCTTCGATCCTAAAGCGAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTTTATATGGGAGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATACTCACCTCCAGATTTTTACACAAGAGTGGGGATTGCTGGAGTCCCTGATGATACCGTCATGAGAAGAACTAAGGCGATAGAGGATAACTGGGTGCCTTCTTGGAACGAAACTTTCGAGTTCCCATTAACTGTTCCGGAACTTTCACTGCTTCGAATTGAGGTTCACGAGTACGATATGTCTGAGAAGGATGACTTTGGTGGCCAATCATGCCTACCTGTTTGGGAGCTAAGAAGCGGCATTCGAGCCGTTCCACTGTATAGCCGCAAGGGAGACAAATACAACACTGTGAAGCTTCTTATGCGCTTTGAATTTTATTGA 1791 0.4377 MSSKQTYSVCFCCRRRFKLAAAEAPPEIKSMFGKYSDDNELMTASHLQKFMVEVQCQQNATEEEAQAIIDSLKHFHRKGLNLDAFFKYLFSDSNLPLLPSLGVHHDMNLPLSHYFIYTGHNSYLTGNQLSSDCSDIPIIKALERGVRVIELDIWPNASKDNIDVLHGRTLTTPVELIRCLNSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMVAQTFGEILFSPGSEALKEFPSPESLKRRIIISTKPPKEYLEAKDKVDDPPQEKASGDNPKQRKVSGDDEAWGKEVPSLKGGTIADYKDNEDEENFDGEEDLEEGDKSSHHNEASEYRRLIAIHAGKPKGGITECLKVDPEKVTRLSLSEQQLEKAAMTYGKEIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMYGMFKANGGCGYVKKPDFLLKNGPNGEIFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPDDTVMRRTKAIEDNWVPSWNETFEFPLTVPELSLLRIEVHEYDMSEKDDFGGQSCLPVWELRSGIRAVPLYSRKGDKYNTVKLLMRFEFY* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0507 596 Pfam C2 domain 469 570 IPR000008 -
Amo07g0507 596 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 595 - -
Amo07g0507 596 CDD C2_PLC_like 466 596 - -
Amo07g0507 596 MobiDBLite consensus disorder prediction 255 289 - -
Amo07g0507 596 Gene3D - 23 97 - -
Amo07g0507 596 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 468 595 IPR035892 -
Amo07g0507 596 SMART C2_3c 468 576 IPR000008 -
Amo07g0507 596 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 460 IPR017946 GO:0006629|GO:0008081
Amo07g0507 596 PRINTS Phospholipase C signature 386 407 IPR001192 GO:0035556
Amo07g0507 596 PRINTS Phospholipase C signature 407 425 IPR001192 GO:0035556
Amo07g0507 596 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Amo07g0507 596 PRINTS Phospholipase C signature 562 572 IPR001192 GO:0035556
Amo07g0507 596 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Amo07g0507 596 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Amo07g0507 596 Pfam Phosphoinositide-specific phospholipase C, efhand-like 27 92 IPR015359 -
Amo07g0507 596 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Amo07g0507 596 Gene3D C2 domain 463 596 IPR035892 -
Amo07g0507 596 SUPERFAMILY EF-hand 18 106 IPR011992 -
Amo07g0507 596 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Amo07g0507 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Amo07g0507 596 ProSiteProfiles C2 domain profile. 448 578 IPR000008 -
Amo07g0507 596 SUPERFAMILY PLC-like phosphodiesterases 105 449 IPR017946 GO:0006629|GO:0008081
Amo07g0507 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 361 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Amo07g0507 596 MobiDBLite consensus disorder prediction 255 327 - -
Amo07g0507 596 SMART plcx_3 105 249 IPR000909 -
Amo07g0507 596 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 595 IPR001192 GO:0035556
Amo07g0507 596 SMART plcy_3 331 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0507 Amo-Chr7 5750800 5755002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0507 3 595 Acyl Lipid Metabolism Gene Families AT3G55940 67.224 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0507 K05857 - gmx:547864 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1509 20 36806756 36811356 Amo07g0507 07 5750800 5755002 PCT
Amo10g1047 10 20518500 20523099 Amo07g0507 07 5750800 5755002 PCT
Amo07g0507 07 5750800 5755002 Amo20g1509 20 36806756 36811356 PCT
Amo07g0507 07 5750800 5755002 Amo10g1047 10 20518500 20523099 PCT