Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0506 ATGGCGCAAAATATCAAAACGATCAAGTACTTCCACCGGAAGTTCGTCCAAGAAGAGCAGACGGCGCCGGAGGATGTTAAGGAAGCTTTTGCCACGTTCGCGGAGGGCGGCGACACCATGTCCGCCGGCCAGCTTCGCGAATTCGTGGACAAGGTTCAGTGCCAACCGCAATACACCGTCGAGGAGTGTGAGCGGATCATGGAGACCTTCTTGAGATCGCGAAGGGACGAAAGTGATAATGATGAGAACAACAAGAAGAAGAAAAAGGTCGGCGACGGCGACGGTAATGACAATGGTGGTTGTTGTTTCACCCTCGAAGAATTCTTCCAGTTCTTGTATTTTGATGAATTCAATGCTCCTCTCTCTCCTGAGGTACATCATGACATGGATGCTCCATTATCACATTATTTCATAAACACAGGGCACAATTCATATCTCACTGGGAATCAACTAAGCAGCGATTGCAGTGAGGTGCCAATCATACAAGCCTTGAATAAAGGTGTTCGAGTTATTGAACTTGACTTATGGCCCAATTCAAATAAAACTGATATTGATGTAGTTCATGGAAGGACACTTACTGCTCCTGTGTCACTATACAAATGTTTAGTGGCCATAAAAGATAATGCTTTTGTTGCTTCTGAATACCCAGTCATTATAACTTTAGAAGACCACCTTACAAAAGATCTTCAAGCTCTAGCTGCAGAGGTAACAAATGAAATATTTGGAGATTTGTTATACTACCCTCCAGAAGATGCAATGGATGAATTCCCATCACCAGAATCATTAAAAGGGAGAATCCTAATATCAACAAAACCACCTCCAGTTGATGAACTAAGAGATACCTTTTCCAAGCGTTTGATAAAGGATGGTAAGGAATCTGAAAGAGAATCTGCTGATGAAGCTCTATCACCCCCTCCAAGCATTGGTTCTGATGTGGACGCTTGTGATAGGTACAATGCAAGTAGTGATCGTGAATGTGAAGAAGAATTGACGCCTTCAAGTGAGATACATAGTGGAGTAATTCATTACAAAAGAATGATTACAATCCATGCTGGAAAACCCAAGGGTCATATAAAAGATTCCTTATCAGTTGATGGCAAAGTTAAGCGTTTAAGTTTGAGCGAACAGGAAATTGAAAGGGCTTCATCTTCTTATGGAGATGATCTTATTAGTTTTACACAGAGGAATATTCTGAGGGTGTATCCTAAGGGGACACGTGTCAACTCCTCAAATTTCCGGCCACATATAGGGTGGTTGTATGGAGCACAAATGGTTGCAATGAACATGCAGGGGTATGGAAAATCTCTATGGCACGCACAAGGTTTGTTTAGAGCAAATGGAGGGAGTGGTTATGTGAAAAAACCTCCACTCCTAATGAACAAAAATGATGATGGCCAATCTAATATTTTTAATCCCAAAACACCATATCCCACCTCCAGAATTATGAAGGTGAAAATATATATGGGAACAGGGTGGATTTCTAATTTCAGCAAAACACACTTTGATACGTTCTCTCCACCAGACTTTTACATAAAGGTGTCTATACATGGTGTACAATATGACAAAGCTAGGCACAGAACAAGGGTGATTTCAGATAATTGGTTTCCAGTTTGGGAAGAAGAATTTGAAATCCCATTGAAAGTTCCAAGTCTTGCATTGGTTCTGATAGAGGCAAGAGAGTATGATAAGCATGAAAAGGATGATTTTGGAGGCCAAACATGTTTCCCTGTCGATGAAATAAGACCGGGCTTCCGTTCAGTCCCTTTATATGATGAAAAGGGCAATAAATATAGCCATGTAAAGCTTTTATTGCGCTTTCAATTTCAACATATTTAG 1836 0.4107 MAQNIKTIKYFHRKFVQEEQTAPEDVKEAFATFAEGGDTMSAGQLREFVDKVQCQPQYTVEECERIMETFLRSRRDESDNDENNKKKKKVGDGDGNDNGGCCFTLEEFFQFLYFDEFNAPLSPEVHHDMDAPLSHYFINTGHNSYLTGNQLSSDCSEVPIIQALNKGVRVIELDLWPNSNKTDIDVVHGRTLTAPVSLYKCLVAIKDNAFVASEYPVIITLEDHLTKDLQALAAEVTNEIFGDLLYYPPEDAMDEFPSPESLKGRILISTKPPPVDELRDTFSKRLIKDGKESERESADEALSPPPSIGSDVDACDRYNASSDRECEEELTPSSEIHSGVIHYKRMITIHAGKPKGHIKDSLSVDGKVKRLSLSEQEIERASSSYGDDLISFTQRNILRVYPKGTRVNSSNFRPHIGWLYGAQMVAMNMQGYGKSLWHAQGLFRANGGSGYVKKPPLLMNKNDDGQSNIFNPKTPYPTSRIMKVKIYMGTGWISNFSKTHFDTFSPPDFYIKVSIHGVQYDKARHRTRVISDNWFPVWEEEFEIPLKVPSLALVLIEAREYDKHEKDDFGGQTCFPVDEIRPGFRSVPLYDEKGNKYSHVKLLLRFQFQHI* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0506 611 PRINTS Phospholipase C signature 132 150 IPR001192 GO:0035556
Amo07g0506 611 PRINTS Phospholipase C signature 158 178 IPR001192 GO:0035556
Amo07g0506 611 PRINTS Phospholipase C signature 575 585 IPR001192 GO:0035556
Amo07g0506 611 PRINTS Phospholipase C signature 397 418 IPR001192 GO:0035556
Amo07g0506 611 PRINTS Phospholipase C signature 255 272 IPR001192 GO:0035556
Amo07g0506 611 PRINTS Phospholipase C signature 418 436 IPR001192 GO:0035556
Amo07g0506 611 ProSiteProfiles C2 domain profile. 463 591 IPR000008 -
Amo07g0506 611 SUPERFAMILY EF-hand 9 128 IPR011992 -
Amo07g0506 611 SMART plcy_3 343 459 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Amo07g0506 611 CDD C2_PLC_like 480 609 - -
Amo07g0506 611 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 127 271 - -
Amo07g0506 611 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 5 609 - -
Amo07g0506 611 Gene3D C2 domain 477 611 IPR035892 -
Amo07g0506 611 Pfam C2 domain 483 582 IPR000008 -
Amo07g0506 611 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 372 458 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Amo07g0506 611 Gene3D - 17 121 - -
Amo07g0506 611 MobiDBLite consensus disorder prediction 288 313 - -
Amo07g0506 611 Pfam Phosphatidylinositol-specific phospholipase C, X domain 129 271 IPR000909 -
Amo07g0506 611 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 481 608 IPR035892 -
Amo07g0506 611 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 370 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Amo07g0506 611 SUPERFAMILY PLC-like phosphodiesterases 127 460 IPR017946 GO:0006629|GO:0008081
Amo07g0506 611 SMART plcx_3 127 271 IPR000909 -
Amo07g0506 611 Gene3D Phosphatidylinositol (PI) phosphodiesterase 124 469 IPR017946 GO:0006629|GO:0008081
Amo07g0506 611 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 5 609 IPR001192 GO:0035556
Amo07g0506 611 SMART C2_3c 481 589 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0506 Amo-Chr7 5738675 5745569 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0506 4 609 Acyl Lipid Metabolism Gene Families AT2G40116 51.669 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0506 K05857 - gmx:100777010 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0286 17 4670757 4695692 Amo07g0506 07 5738675 5745569 hybridization
Amo20g1512 20 36869873 36877496 Amo07g0506 07 5738675 5745569 PCT
Amo10g1050 10 20577475 20583525 Amo07g0506 07 5738675 5745569 PCT
Amo07g0506 07 5738675 5745569 Amo20g1512 20 36869873 36877496 PCT
Amo07g0506 07 5738675 5745569 Amo10g1050 10 20577475 20583525 PCT