Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0462 ATGCATATGAAGGCAAAGAGAGGAAAACGTTCAGAGGCCTTTTGGCCTTCCATTGTGATGAAAAAGTGGCTGAATATTAAGCCTAAGGCCAATGATTTTAGTGAAGATGAAGTTGATGCTGAAACTGAAACCGAAACTGAAACTGAGAGTGAAGATGATGGTTCTGTTAAGGATTCAAGAACTCGAATGCTCCAAGATAATCCACCTAGAACTCAAGGGAACCAATGCATATTCCAAAGTCATTTATCATCAGATGCAGCTTGCAAGGGAAACAAGACAAGACACAGAAGAGGGAAATCAGAAACACTTCGCGCTCAGTACATAAATTCTAAGGAAGTGAGGGTGACAATTGGAACTTGGAATGTTGCTGGAAGAACTCCAAGTGAAGATCTTGGGATTGATGAATGGCTTTCTACTCAAGAACCAGCAGATATTTACATTCTGGGGTTTCAAGAGGTAGTTCCATTGAATGCTGGAAATGTACTAGGAGCAGAGGACAATGCACCAATCAGAAAATGGGAAGCAATCATTAGAAGAACACTAAACAAGTCTTATGAGCCTGATGGAATACACAAAAGTTACAGCGCGCCTCCTTCGCCGGTGCTAAGAACTACTTCTGCTGATGATATTCTTCTAGCAGAGAATATAGATGGTAATGCAATAGATATGGTGATGAATGAGGAGTATGTAGGAACTGTAGCTGACAATTATGATCTGCATCAGCAGAATGAAGCTAAAGATATAATTGGGATAAGCAAGAGTTTGGAGTTGAGAAAAATCTATGGCCTTGATCTTCAGAAGATAATAGATTGGCCTGAAAGACCACTAGATGCAATCCCACAAATTGTTGATTCAGATGCAAAGTTGAGGAGAGTACTAAGTAGCTCAGCAAGAATTGGATTTAACAGGAATGAAAGTTCTTTGATATATGGTGCTGGATTGAAGAGCTCGCACCATAGCTCTGGAAACTTGGGATTGTTGTGGAAAGAGCAGAAAGTGATACCTGAAATAGTTGAGTCCTTAGATGAAGTCACTGACCTGTTAATAGCTGAGGAAGATGATGCTTTTGTTGAGTTACCCGAAAGCCATGTTCATGACAATGAAGATGGATTAAGTGCCTTGAATTCGCGGCCGAGGTATGTTCGGATTGTCAGCAAGCAAATGGTAGGGATCTATGTCTCTGTTTGGGTGCAGAGGAAGTTGAGAAGACACATTAACAATTTGAAAGTTTCTCCTGTTGGTGTTGGTTTCATGGGCTACATGGGAAACAAGGGTTCTGTTTCAGTTAGTATGTCTCTCTATCAGTCACGCCTGTGCTTCGTTTGCTCCCACCTTACTTCCGGCCAAAAGGATGGAGCTAGGCGAAACTCCGATGTTCACGAAATCCTAAGAAGAACTTGCTTTTCTTCCTCTTCTGTCTTTGATACAGATCAACCACAAACAATCCCATCTCATGATCAAATTTTCTGGTTCGGGGATTTGAATTATCGTATTGACATGTTGGATACCGAGGTTCGAAAGTTGGTGGCTCTAAAGAAGTGGGATCAACTTAAGAATAATGATCAACTAAGCAAAGAATTGCGAGAGGGGCATGTATTTAGTGGATGGAGAGAGGGATTGATAAACTTTCCACCAACTTACAAGTATGAATTTAACTCTGATAGATATGTTGGTGAGAACACAAAAGAAGGTGAAAAGAAGAGATCTCCAGCATGGTGTGACCGTATATTGTGGCTAGGAAAAGGTATAAAGCAACTTCAATATGAACGTGCAGAGATTAAGCTCTCAGATCATAGACCTGTTAGTTCAATATTCTTGGTTGAAGTTGAAGTATTTGACCACCGAAAACTTAAGAGAGTTTTAAATGTCAATAGTGCAGCAATACACCCTGAGATATTTCTTGATGAAGATGGTGCAATAGAATCATATTATTAG 1935 0.4026 MHMKAKRGKRSEAFWPSIVMKKWLNIKPKANDFSEDEVDAETETETETESEDDGSVKDSRTRMLQDNPPRTQGNQCIFQSHLSSDAACKGNKTRHRRGKSETLRAQYINSKEVRVTIGTWNVAGRTPSEDLGIDEWLSTQEPADIYILGFQEVVPLNAGNVLGAEDNAPIRKWEAIIRRTLNKSYEPDGIHKSYSAPPSPVLRTTSADDILLAENIDGNAIDMVMNEEYVGTVADNYDLHQQNEAKDIIGISKSLELRKIYGLDLQKIIDWPERPLDAIPQIVDSDAKLRRVLSSSARIGFNRNESSLIYGAGLKSSHHSSGNLGLLWKEQKVIPEIVESLDEVTDLLIAEEDDAFVELPESHVHDNEDGLSALNSRPRYVRIVSKQMVGIYVSVWVQRKLRRHINNLKVSPVGVGFMGYMGNKGSVSVSMSLYQSRLCFVCSHLTSGQKDGARRNSDVHEILRRTCFSSSSVFDTDQPQTIPSHDQIFWFGDLNYRIDMLDTEVRKLVALKKWDQLKNNDQLSKELREGHVFSGWREGLINFPPTYKYEFNSDRYVGENTKEGEKKRSPAWCDRILWLGKGIKQLQYERAEIKLSDHRPVSSIFLVEVEVFDHRKLKRVLNVNSAAIHPEIFLDEDGAIESYY* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0462 644 Gene3D Endonuclease/exonuclease/phosphatase 334 631 IPR036691 -
Amo05g0462 644 SUPERFAMILY DNase I-like 104 625 IPR036691 -
Amo05g0462 644 MobiDBLite consensus disorder prediction 36 52 - -
Amo05g0462 644 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 9 636 - -
Amo05g0462 644 SMART i5p_5 303 613 IPR000300 GO:0016791|GO:0046856
Amo05g0462 644 Gene3D Endonuclease/exonuclease/phosphatase 93 204 IPR036691 -
Amo05g0462 644 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 9 636 IPR045849 GO:0004445|GO:0046855
Amo05g0462 644 MobiDBLite consensus disorder prediction 30 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0462 Amo-Chr5 5384287 5387344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0462 372 578 Acyl Lipid Metabolism Gene Families AT2G31830 36.638 5.58e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0462 K24221 - ccaj:109800886 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0462 05 5384287 5387344 Amo01g1525 01 31661059 31667505 PCT
Amo05g0462 05 5384287 5387344 Amo11g1092 11 32671941 32678468 PCT
Amo01g1525 01 31661059 31667505 Amo05g0462 05 5384287 5387344 PCT
Amo11g1092 11 32671941 32678468 Amo05g0462 05 5384287 5387344 PCT