Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2129 ATGAAGAGATTGCAACTAGGCACAATTTCTTTGGTCCTTCTTCTGATTATTCTTACAAAATCTTCAACTACCAATGCAGTAGAAGATGACAGTGTTAAGAATGAAGAATCTGACAAGGAAGAGCAAAATCATGTTCCAAATTCTACCTCAAGTTATGGGATTGAAATAGTGGGGGAGATGGAAGAAGATGAATGGGAAATGGTGCAAAAGAGAGGGAACCAATTTGTGCTGAATGAGAAACCATTTTACATAAATGGATTCAACACATACTGGCTGATGGTGTTTGCTGTGGATGAGTCAACTAGAGGGAAGGTCACTGAGGTGTTCCAACAAGCTTCCTCAGTTGGCATGACCGTTTGTAGGACTTGGGCCTTCAATGATGCCCAATGGAGGGCCCTACAAAAATCTCCATCCGTTTATGATGAAGATGTCTTCAAGGCACTGGATTTTGTGGTAAGTGAAGCAAAGAAATCCAAGATCAGGTTGATATTATCACTGGCAAACAATTGGGAAGCATATGGTGGAAAAGCACAGTATGTGAAATGGGGAAAAGATGCTGGCCTCAATGTCTCTTCTGATGACGACTTCTTCTCACATCCAACTCTTAGAACCTACTACAAGAACCATGTTAAGACGGTGTTGAATAGAGTGAACACATTGACAAATATAACATACAAGGAAGATCCAACCATATTTGCATGGGAATTGATGAATGAACCTCGATGCACCTCAGATCCCACTGGTGATAAGCTTCAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAGATTGATGCAAAGCACCTAGTAGAAATTGGAGTTGAAGGATTTTATGGGCCCTCAACCCCTCACAGAACTCAGTTCAATCCAAATTCATATGCAACACAAGTTGGAACTGATTTCATTAGGAACCACCAGGTTCTTGGTGTTGACTTTGCTTCTGCTCACATATATGCTGACTCTTGGATCTCACAGCAAATTTCCGAAAGCCATCTGGAATTCATAACATCATGGATGAAATCCCACATAGAAGACGCAGAAAAGCATCTGGGAATGCCAATAATCTTTGCAGAATTCGGTGTATCATCAAAGGACCCTGGCTACAATGCAACATACAGAGACAACCTTATAACAAGTGTGTACAAAACAATCTTAAACTCCACAAAGAAAGGAGGAAGTGGCGGCGGAACACTCTTGTGGCAGGTGTTTCCTGAAGGAACTGATAACATGGATGATGGTTATGCTATTGTGCTCTCTAAGTCTCCTTCTACTTCTGCTGTTGTGTCACTTCAGTCCTCAAGGCTTGCTTTGTTCAATTCAATGTGTTCTTCTAAATTCCAGTGGAGTTGTAAGAAGAAGAAAGTCATCTATGATCCTCATGATGAATTCTAG 1395 0.41 MKRLQLGTISLVLLLIILTKSSTTNAVEDDSVKNEESDKEEQNHVPNSTSSYGIEIVGEMEEDEWEMVQKRGNQFVLNEKPFYINGFNTYWLMVFAVDESTRGKVTEVFQQASSVGMTVCRTWAFNDAQWRALQKSPSVYDEDVFKALDFVVSEAKKSKIRLILSLANNWEAYGGKAQYVKWGKDAGLNVSSDDDFFSHPTLRTYYKNHVKTVLNRVNTLTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQDWIQEMAFHVKKIDAKHLVEIGVEGFYGPSTPHRTQFNPNSYATQVGTDFIRNHQVLGVDFASAHIYADSWISQQISESHLEFITSWMKSHIEDAEKHLGMPIIFAEFGVSSKDPGYNATYRDNLITSVYKTILNSTKKGGSGGGTLLWQVFPEGTDNMDDGYAIVLSKSPSTSAVVSLQSSRLALFNSMCSSKFQWSCKKKKVIYDPHDEF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2129 464 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 9 457 - -
Amo04g2129 464 MobiDBLite consensus disorder prediction 29 43 - -
Amo04g2129 464 SUPERFAMILY (Trans)glycosidases 67 431 IPR017853 -
Amo04g2129 464 Gene3D Glycosidases 65 439 - -
Amo04g2129 464 MobiDBLite consensus disorder prediction 27 49 - -
Amo04g2129 464 Pfam Cellulase (glycosyl hydrolase family 5) 78 376 IPR001547 GO:0004553|GO:0071704
Amo04g2129 464 PANTHER - 9 457 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2129 Amo-Chr4 91405892 91410462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2129 37 454 Glycoside Hydrolase AT5G01930 69.139 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2129 K19355 - gmx:100811794 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2129 04 91405892 91410462 Amo12g0437 12 7146519 7148857 PCT
Amo04g2129 04 91405892 91410462 Amo02g0518 02 6404494 6406540 PCT
Amo12g0437 12 7146519 7148857 Amo04g2129 04 91405892 91410462 PCT
Amo02g0518 02 6404494 6406540 Amo04g2129 04 91405892 91410462 PCT